Hydra vulgaris (swiftwater hydra): 100192294
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Entry
100192294 CDS
T01080
Name
(RefSeq) ATP-dependent RNA helicase DED1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hmg03036
]
100192294
Enzymes [BR:
hmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100192294
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100192294
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
RRM_1
Helicase_C
RRM_5
RRM_occluded
RRM_PARP14_3
BRAP2
ResIII
zf-CCHC
Utp25_C
zf-CCHC_3
P-loop_SecA
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
100192294
NCBI-ProteinID:
XP_047122819
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All DBs
Position
14:21594143..21633147
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AA seq
890 aa
AA seq
DB search
MFAALKAGAAISKLPQSVEKPVYEKNEINNNTGNRRGPQVKVFNIPEGSDSSDLKAFFSS
AGDVRNVKILPVRDGKTTTLGFVEFASESECQNAIQQKNEQDFNGSTLRVVSNNETTPKS
DFSQSSGGFKGGNRFQVKVYNIPNGTDSNDIQNLFGGAGTVKEVKILPCQEGKNVTLGFV
HFESAEDVSNAVSMFNNIEFNGSKLRVLDADNNSSCSTPFSNGFKSNQNESPSKPMGRGA
QLISQIKSQRAQAKVFGIPSGTSEDDIMEYFSSAGLVKNVKLLPIREGKDTHLCFIEYES
NSEVEQAVQTLNGTEFNGSQLKVMNGENQINTGNNMQNGKESSWGSKGSAPINRIPKEDR
AFSDQFGEMVIGEFKSDACRRCGEVGHYAKECLNAAGPNGSAQAVTYIPPPPPETENEIF
EIGSNQGINFEKYKHIPIELSGTNRPKPIQSFSEANLHPVCLKNLDLAKYKEPTPIQKYA
IPAILAKRDVMACAQTGSGKTASFLLPIITNLMNEGLDNIDSNIDGVALPLAAILAPTRE
LVVQLFTEARKFSYNSSLKPVVLYGGVAVAHQADRLRMGCHLLVATPGRLEDFIKRGKVN
FQNLKYLILDEADKMIDMGFGPQIEHIIEFSGMPPKGIRNTLMFSATFPDQIQHLAAQFL
NDYLFLTVGRVGGTCTDVTQSVIQVSGTKKRETLENLLQTSGSDRTLVFVEKKRDADFLA
NFLSQKNFPATSLNADRTQEERESALKDFRNGIAPILVATAVAARGLDINDVKHVINYDL
PKDANEYVHRIGRTGRIGNKGKATSFFDLDRDGSLARSLVKLLSDAEQDVPDWLENCALG
AVGTGYGPDNSQFRDQRIKTGQNGNSNKKFPNATAATKPTSVLNDDEEEW
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagccttaaaagcaggagctgctatttcaaaactgccacaatcagtagagaag
cctgtatatgaaaaaaacgaaattaataataacacaggaaatagaagaggaccacaagtt
aaagtgtttaatattccagaaggatctgattcaagtgatttgaaagcttttttttcatct
gctggagacgtaagaaatgtaaaaattttaccggttcgtgatggaaagacaacaactctt
ggctttgttgagtttgcttcagaaagtgaatgccaaaatgctattcaacagaaaaatgaa
caagacttcaatggaagcacacttcgtgttgtatcaaataatgaaacaacaccaaaaagt
gatttcagtcagtctagcggtggctttaaaggtggcaatcgatttcaagtaaaagtttac
aatattccaaatggaaccgatagtaatgatattcaaaatttgtttggtggtgctggtact
gtaaaagaagtaaaaatcttaccatgtcaagaaggcaaaaatgtaactcttgggtttgta
cattttgaaagcgctgaagatgttagcaatgcagtttctatgtttaacaatattgagttt
aatggctcaaaactacgtgttttagatgctgataataactccagctgctcaacaccattt
tcaaatggctttaaaagtaaccaaaatgaatcacccagtaaaccaatgggaagaggtgca
caacttatttcacaaataaaatctcaaagagctcaagcaaaggtttttggcattccaagt
ggaacctctgaggatgacatcatggagtatttttcatcagctggattagtgaagaatgta
aagctgttgccaataagagagggtaaagacacacatctttgctttattgagtatgagagc
aatagtgaagttgagcaagcagtgcagacactaaatggaacagaatttaatggttcacag
cttaaagtaatgaatggagaaaatcaaataaacacaggtaataatatgcagaatggaaaa
gagagttcatggggaagtaaaggctctgcaccaattaatagaatcccaaaagaagacaga
gcattctctgaccaatttggtgaaatggtaattggagaatttaaatcagatgcatgcaga
cggtgtggtgaagttggtcattatgccaaggaatgtcttaatgcagcaggtccaaatgga
tcagctcaagctgtcacttatattccaccaccaccaccagaaactgaaaatgaaattttt
gaaattggttcaaatcaaggcattaactttgaaaaatacaaacatattcccattgaactg
agcggtaccaatcgccctaaacctatacaaagcttttctgaagcaaatttgcatccagtc
tgtctgaaaaaccttgatctagctaaatacaaagaaccaactcctattcagaaatatgct
atacctgctattcttgcaaaaagagatgtaatggcatgtgcccaaactggatcaggaaaa
accgcttcttttttgttgcctattataacaaatcttatgaatgaaggtcttgataatatt
gacagtaatattgatggagttgcacttccattagctgcaattttagctccaacgcgtgaa
cttgtagttcaattgtttactgaagcaagaaagttttcttataacagttcactgaagcct
gttgttttatatggtggggtggctgttgctcatcaagctgatcgcttacgaatgggttgt
catcttcttgttgcaacacctggtcgacttgaagattttataaaaagaggaaaggtgaat
tttcaaaatctgaaatacctgatccttgatgaagcagacaagatgattgatatgggtttt
gggccacaaattgaacatattattgaattctctggaatgcctccaaaaggaatccgcaat
acacttatgttcagtgcaacttttccggatcaaattcagcatcttgctgcccaatttttg
aatgattatttatttttaactgtcgggcgtgttggtggaacatgcacagatgttactcaa
tcagtaattcaagtttctggaacaaaaaaaagagaaacattggagaatcttttgcaaact
tcaggaagcgatcgaacacttgtgtttgtagagaagaaaagggatgcagactttttagca
aactttctttcacaaaagaacttcccagccactagtttaaatgcagatcgtacacaagaa
gagcgtgaatctgctctcaaagatttcagaaatggaattgcaccgattcttgtggctact
gctgtagcagcaagaggtttggatattaacgatgtgaaacatgttatcaattatgatttg
ccgaaagacgccaacgaatatgttcatagaattgggcgaaccggtcgaattggaaataaa
ggaaaagcaacatctttttttgatcttgatcgagacggaagtttagcacgaagccttgtc
aaactattatcagatgccgagcaagatgtacccgattggctggaaaattgtgcattaggt
gcggttggaactgggtatggacctgataacagccaatttcgtgatcaacgcataaaaact
gggcaaaacggaaattcaaataaaaaatttccaaatgcaactgctgcaactaaacccact
tctgtgttaaatgacgatgaagaggagtggtaa
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