Hydra vulgaris (swiftwater hydra): 100197032
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Entry
100197032 CDS
T01080
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100197032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hmg03041
]
100197032
Spliceosome [BR:
hmg03041
]
Common components
Common spliceosomal components
SR proteins
100197032
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_7
SPOR
Motif
Other DBs
NCBI-GeneID:
100197032
NCBI-ProteinID:
XP_002167286
UniProt:
A0A8B6XSZ9
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All DBs
Position
3:57436114..57469528
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AA seq
394 aa
AA seq
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MSDYRERRDRYSDPRPPLPSKSMMGARIYIGKLPGDIRERDIDKAFSKFGHVREIAMKGN
YCFLQYEKTREAEDAVYEMHDRSFFGERIQVEHARQPKEFGFRAPSRFGGSRGYGGYSRS
STYSSSRDYSRRRSPPQRSDYRLSVTNLSTRCDAQDLKAVMQKAGDVVFSDAHRRRVGEG
VVEFASRKDMERALKKLDGLEINGKPIKLKVEEARNAHKSRSRSRSESGSRSRSKSESGS
PSRKRRRHSSRSGSDDASDREENERTSAKVDEKAASDDEEFEEAERNVKRKKEQRKEANG
DKGSGSESDGPEELSKDEAENDDDEDTEIVEEIVEEEIEVEEEVTQSNDEEDETEVESKK
HEEPKEDNLDELTEPVQRNRESGSESPECEENNE
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactacagggaacgcagagatcgttatagtgaccctcgtccacctcttccatcc
aaaagtatgatgggtgctcgaatatatattggtaaacttccaggtgatatcagggaaaga
gatatagataaagcttttagtaaatttggacatgtgagagaaatagctatgaaaggaaat
tattgcttcctacaatacgaaaaaacaagagaagctgaagatgcagtttatgaaatgcat
gatagatctttttttggtgaaaggatacaagtagaacatgcacgacaaccaaaagagttc
ggtttcagagccccatcaagatttggtggaagtcgcggttatggcggttacagcagaagt
agtacatatagtagcagtcgtgattattcaaggcgacgatctcctccacaaagaagcgat
tacaggctttcagtaactaatctttccacaagatgtgatgctcaggatctcaaagctgtg
atgcaaaaagcaggcgatgttgtattttcagacgcacataggcgcagggtcggagagggt
gttgttgagtttgcatcaagaaaagatatggagcgagctttaaagaaacttgatggtttg
gaaattaacggaaagcctattaaactaaaagtggaagaggcacgcaatgctcataagtca
cgatctcgatcccgatctgaatccggatcaagatcaagatcaaagtcagaatctggatct
cccagcagaaaacgacggcgtcattcatcgagatccggttcagacgatgcctcagatcgt
gaagaaaacgagcgtacaagtgccaaagttgatgagaaagctgctagcgatgatgaagaa
ttcgaagaagcagaacggaatgttaaaaggaaaaaagagcaacggaaagaagctaatggt
gataaaggatcaggttcggagtctgatggtccagaagagttaagtaaagatgaagctgaa
aatgatgacgatgaagacactgaaatagttgaagaaattgttgaggaagagattgaagtc
gaagaagaagtaactcaatccaatgacgaagaagacgaaactgaagtagaatcaaaaaaa
cacgaggaacctaaagaagataatttagatgaacttactgaacctgtacaaagaaaccgc
gaaagcgggagcgaatcacccgaatgcgaagaaaataacgaataa
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