Hydra vulgaris (swiftwater hydra): 100197220
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Entry
100197220 CDS
T01080
Name
(RefSeq) pseudouridine-metabolizing bifunctional protein C1861.05
KO
K16330
pseudouridylate synthase / pseudouridine kinase [EC:
4.2.1.70
2.7.1.83
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg00240
Pyrimidine metabolism
hmg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
100197220
Enzymes [BR:
hmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.83 pseudouridine kinase
100197220
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
100197220
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
PfkB
DUF2325
Motif
Other DBs
NCBI-GeneID:
100197220
NCBI-ProteinID:
XP_012554630
UniProt:
A0A8B7D8W7
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Position
12:28877688..28946978
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AA seq
719 aa
AA seq
DB search
MYKAFPMRSFSWLEKRCTKSFFQINRRIGTIPPEFFKVGDHVKTAFKNYQPVIALESTII
THGMPYPDNLSTALKVENIVKKYGAYPATVGVIDGKLIVGLDTDEIKYLSSKKTEFLKIS
KRDLSYVLSKKLSGGTTVSSTMFASHLAGIKVFVTGGIGGVHREVFQTLDISSDLTELGR
TPVAVVCAGIKSILDIKLTLEYLETLGVPVITYGKSKTFPAFYCSDSGHMAPMCLDNVED
IAKMLYCHNQLGVKSGVVIGVPIPEEFSADSSAIENIIQKALAEASSKNIVGKDITPFIL
NRVVQLSDGKSLVSNIMLIENNAKVGAQIAKSYSSIVNKHGCISDNSEQKKKTLKINMEY
TENKRPVVIGGSVFDIVSKAKNVDSKAETKSPGNIYQGYGGVARNIAECLTRLGTNPFLI
STVGLDDFGEMMIANMQKINMDTSGVMRSKKSTACYSAMLNKNGDLLMGVGDMDINEELT
PITIEKYEGVIQKAPIVIMDANSKHETIQTVLLMCKKHNVPVWFEPTSVSKASVAFSTKS
KLHINFASPNFNELKAIHTTLSTKKKHPVLQERKFSEDVSLNEVINNCVHYADECAQYVN
NLIVTLGKHGVLVLTRAPFDEPFSYELVNNALSAKLYPSSKESFSLQIKNASGAGDSFVA
GVVFGILQKYDADTCIRSGLLAANLSLQSYNAISEEVTPEKFSFVNIRNWGNFEPQKIF
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagcatttcccatgagatcgttttcctggctagaaaaaagatgcacaaagtct
ttttttcaaataaatagaagaattggaactattcctcctgaattttttaaagttggcgat
catgttaaaactgcatttaaaaattatcaaccagttattgctcttgaatcaacaataata
actcacggaatgccctatccagacaatttaagcactgctctaaaggttgaaaatattgtg
aaaaaatatggtgcttatccggcaactgttggagttattgatggaaagttgatagttggt
ctagacactgatgaaatcaagtatttatcatcaaagaagacagaatttcttaagatatca
aagcgagatcttagttatgttttaagtaagaagctaagtggtgggactacagtatcttct
acaatgtttgcttcacacctagccggaataaaggtatttgttacaggaggtattggcgga
gttcatagagaagtttttcaaactttggatataagctcagatcttacagaactgggtaga
actccagttgctgttgtttgcgctgggataaaatcaattcttgatataaagttaacgtta
gagtatttggaaactcttggggtaccagtaataacgtatggaaaatctaaaacattccca
gcattctactgttctgacagtgggcatatggcacctatgtgtctagacaatgttgaagat
attgctaaaatgctttactgtcataaccaacttggtgtcaaaagtggagttgttattggt
gtgccaatacctgaagaattttcagcagatagctctgccatagagaatataatacaaaag
gctttagctgaagcaagttcaaagaacattgttggtaaagatattacaccatttatatta
aatcgtgttgtacaactatctgatggaaagtcattagtttcaaatattatgctgatagaa
aataatgcaaaagttggtgctcaaatagcaaaatcttactcttcaatagtaaacaagcat
ggttgcatctcagacaacagtgaacaaaaaaaaaaaactttgaagatcaatatggaatac
actgaaaataagaggcctgtagtaattggtggatcagtttttgatatagtttcaaaagca
aagaatgtggattcaaaagctgaaacaaaaagccctggaaatatatatcaaggctatggt
ggtgtagcaagaaatattgctgaatgtttaactcgacttggtaccaatccctttctcatc
agtacagttggtttagatgattttggagaaatgatgattgctaacatgcaaaaaataaat
atggatacgtcaggggtgatgagatctaaaaaatcgactgcttgttactcagcaatgtta
aataaaaatggagatttactaatgggtgttggtgatatggatataaatgaagaattgaca
ccgataacgattgaaaagtatgaaggtgtaattcaaaaagctccgatagttattatggat
gctaacagtaaacatgaaactattcaaactgttttgttgatgtgtaaaaaacacaatgtt
ccagtatggtttgaaccaacttccgttagcaaagctagtgttgccttctcaacaaaaagt
aaacttcatataaactttgcttcgccgaatttcaacgagcttaaagctatacacacaaca
ctctcaacaaaaaaaaaacatccagttctacaagaaaggaagttttcagaagacgtttct
ttaaatgaagttattaataattgtgttcactatgcagatgagtgtgctcaatatgtaaat
aatttaattgtgactttgggaaaacatggtgtattagttttaaccagagctccttttgac
gaacctttttcatatgaacttgttaataatgctttgtcggcaaaactttatccttcctct
aaagaatccttttcgttacaaataaaaaatgcgagtggagctggagatagctttgttgct
ggcgttgtatttggcattttgcaaaaatacgatgcagacacatgtattcgatctggtctt
ttggcggcaaatctaagcttacagtcttacaatgctatatctgaagaagttacacctgaa
aagttttcttttgtaaatattcgcaattggggtaattttgagccacaaaaaatattttga
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