Hydra vulgaris (swiftwater hydra): 100197301
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Entry
100197301 CDS
T01080
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100197301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmg03400
]
100197301
DNA repair and recombination proteins [BR:
hmg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100197301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
100197301
NCBI-ProteinID:
XP_047123142
UniProt:
A0A8B7DIH8
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All DBs
Position
14:complement(26921701..26975718)
Genome browser
AA seq
755 aa
AA seq
DB search
MRRSLAPSKAQSGTILKRKVSTSHSDDEDNDYKPDLTISKPKKKLPAYNTNQFVSQYRKP
LSNVNNVTLESSFVGGESTHELLIKSILAKPFKVPMKNFKGSPHGRSLGMRKSMSKLCLY
DPFEEGALVLYSPPEVSAHNKLTSKSEENLVHVVVDPQLTSVLRPHQREGVKFLYDCVVG
NRIKDNFGCIMADEMGLGKTLQCITVLWTLLRQSPSGKPEINKAIIVAPASLVKNWDKEI
EKWLKGRVHTLAIDSGSKSEIDDKLSSFMSQQQVRAPTPILIISYETFRLHTDVLHRSPV
GLVICDEGHRLKNLENQTYQALNLLKTKKRILLSGTPIQNDLLEYFSLVHFVNGGMLGTV
SEFRRKFEAPILRGRDGAGSESDQKIGEEKLAELLSIVSKCIIRRTSAILSKYLPVKTEQ
IVMCKLTTLQSKLYKAFVNSKVARMQLQADAKLNASSLAFINLIKKLCNHPELIYDKQKL
CEDNLQEVLNEFPPNFNTKVFASDLSGKMQVLDFILALVKSTSNDKVVLVSNYTQTIDLF
EKLSRLRGYQYVRLDGSMSIKKRMKVVDRFNDPNSNDFLFMLSSKAGGCGLNLIGANRLV
MFDPDWNPANDDQAMARVWRDGQKKEVFIYRLLSTGTIEEKILQRQTHKKALSSCVVDEE
VDVERHFSLNELKELFKYDSETICDTHERLKCRRCVNNVQVKAPPDQADCTNDLTLWNHS
ASTKGVSDIILKRAWNSGISFVFHQKSHDAMIVTA
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaagcttggccccaagtaaagcacaaagtggcacaattttaaagcgaaaagtc
tcaacttcccacagcgatgatgaagacaatgattataaacctgatttaactatttcaaag
ccaaaaaaaaaattaccagcatacaatactaaccagtttgtttcacaatatcgaaagcca
ttatcaaatgtcaataatgttactttggaaagtagttttgttggtggagaatctactcat
gaactactcatcaaaagtattcttgcaaagcccttcaaagtgccaatgaaaaattttaag
ggttcaccccatggtcggagtttgggtatgagaaagtcaatgagtaaactttgcttatat
gatccatttgaagagggagcattagttttatattcacctcctgaagtatctgctcataat
aaacttacatcaaaaagtgaggaaaatcttgtacatgttgttgttgatccgcagctgaca
tctgtactaaggccacatcagagagagggtgttaaatttttatatgactgtgttgttggt
aatcgtatcaaagataactttggttgcataatggctgatgaaatgggtctggggaaaaca
ttgcaatgtataacggtgctttggacattgttgagacaaagtccatcaggtaaaccagaa
atcaacaaagcaataatagttgctcctgcaagtttagtaaagaactgggacaaagaaatt
gaaaaatggttaaaagggcgagtgcacacactagcaattgattccggctcaaaatcagag
attgacgacaaattatcttcttttatgagccaacagcaagttcgagcacccacgccaatt
cttatcatttcttatgaaacttttcggcttcatactgatgtccttcaccgctctcctgtt
ggtcttgtaatttgtgatgaaggacatcgtctaaaaaatctcgaaaatcaaacttatcaa
gcactaaatcttttaaaaacaaaaaaaagaattttactttcaggaacacctattcaaaat
gatttgcttgagtattttagtttagttcattttgtgaatggaggaatgttaggtactgta
tctgaatttcgcagaaaatttgaagcaccaattcttagaggtcgtgatggtgctggttct
gaaagtgatcaaaaaattggagaagaaaaattagctgaacttttgtccattgtcagcaaa
tgtattatcagaagaacatctgcaattctttccaaatatctaccagttaaaactgaacaa
attgtaatgtgtaaactaaccacattacagtcgaaactgtacaaagcttttgtaaattca
aaagtagcacgaatgcaactacaagctgatgcaaagttaaatgcttcttcacttgctttt
atcaacctaataaaaaagttatgtaatcatccggaactaatttatgataaacaaaaactt
tgtgaagataacctacaagaagttttgaacgaatttcctcctaatttcaacacaaaagtt
tttgcttctgatttatctggtaagatgcaggttttggattttatattggcattagttaaa
tcaacttcaaatgacaaggttgtccttgtttctaactatacacaaacgatagatttgttt
gaaaagttgtctcgattaagaggttaccaatatgttagattagatggttcaatgtcaatc
aaaaaaagaatgaaagttgttgacagatttaatgatccaaatagcaacgactttttgttt
atgttgagtagcaaagcaggaggttgtggtttaaatttaataggcgctaacagactggtt
atgtttgatcccgactggaatccagccaatgatgatcaagccatggcaagagtatggaga
gacggacagaaaaaagaagtgtttatttatcgacttttatcgactggaactattgaagaa
aaaatcttgcagcgacagacgcacaaaaaagcgctgagcagttgtgtagtggacgaagag
gttgacgttgaaagacatttttcattaaacgagctaaaagaacttttcaagtacgattct
gaaacaatttgtgatactcatgaaagactaaaatgcaggcggtgcgtcaataacgtgcaa
gttaaagctcctccggaccaagctgattgtacgaatgatcttactttatggaatcatagt
gcgagcacgaaaggcgtttcggatataatattaaaacgtgcgtggaattctgggatatct
tttgtttttcaccagaaatcgcatgacgcaatgattgttaccgcctaa
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