Hydra vulgaris (swiftwater hydra): 100197601
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Entry
100197601 CDS
T01080
Name
(RefSeq) general transcription factor IIE subunit 2
KO
K03137
transcription initiation factor TFIIE subunit beta
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100197601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100197601
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
100197601
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_beta
TFA2_Winged_2
YppF
Motif
Other DBs
NCBI-GeneID:
100197601
NCBI-ProteinID:
XP_004208048
UniProt:
T2MGC7
LinkDB
All DBs
Position
5:complement(44379078..44380694)
Genome browser
AA seq
293 aa
AA seq
DB search
MDPSLMKDLNAFKKRSLNQPAVESKKQVLNTAIIESVRKPKKRRRPELPPQLLQQSKKQA
ANQAFNYKTHTQIRTKSRFSILSSIVDLVKNRYQNKEFEPLTLDELLDLTKNTDIKSYDK
EWLADESLKNNPKILFKDDKYSFKPKYALRDKKSLIRLLEKHDQSGLGGVLLDDVREGLP
NADEIVKSISDKIMFVTRSNDKKAILFYYDSSYAVHVDEENQKHWRSVAVEGLAEPDIEK
YLSNCGISTMTGVSSALQKRPEKRKGGKRKKNMRLLNSHLVGDVLKDYSEPSK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggatccatctttaatgaaagatttaaatgcttttaaaaaaagaagtcttaatcaacct
gcagttgaatctaaaaagcaagttttaaatacagcaatcatagaatcagttcgaaagcca
aagaagcggcgtcgacctgaacttcctccacagttattgcagcaatcaaaaaaacaggct
gcaaatcaagcttttaactataaaactcatactcagataagaacaaaaagtcgtttttca
attttatcaagtattgttgatttagtgaaaaatcgctatcaaaacaaagaatttgagcca
ctgactttagatgaattattagatcttacaaaaaacactgatatcaagtcctatgataaa
gagtggttagcagatgaatcattaaaaaataatcctaaaattttgtttaaagatgataag
tattctttcaaacctaaatatgccttacgtgacaaaaaatctcttattcgcttgctcgaa
aagcatgatcaatctgggttaggtggggttttattggatgatgttcgggaaggtttacca
aatgctgatgaaatcgtcaagtcgataagtgataagatcatgtttgttacacgtagtaat
gacaagaaagccattctcttttattatgattctagctatgctgttcatgtagatgaggaa
aatcaaaaacattggaggagtgtagcagttgagggattagcagagccagacatcgaaaaa
taccttagcaattgtggaataagtactatgacaggggtttcctctgcattacaaaagcgc
ccagaaaagcgcaaagggggtaaaagaaagaaaaacatgagattattaaactcccacttg
gttggtgatgttttaaaagattattcagagccatcaaaatag
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