Hydra vulgaris (swiftwater hydra): 100197626
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Entry
100197626 CDS
T01080
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100197626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100197626
03036 Chromosome and associated proteins [BR:
hmg03036
]
100197626
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100197626
Coactivators
SAGA/TFTC/STAGA complex
100197626
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100197626
STAGA complex
100197626
TFTC complex
100197626
SAGA complex
100197626
SLIK complex
100197626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
100197626
NCBI-ProteinID:
XP_002168543
UniProt:
T2MFF4
LinkDB
All DBs
Position
12:4951697..4959393
Genome browser
AA seq
496 aa
AA seq
DB search
MSEGQGFDEKTKEIVDSAFTSEIIKVIVESNSYDKPPDDVLQYLADNITFKVKKVIQEAV
KFQNKSKRLKLTSRDIDHSLKVQNVEPVYGFSSSDFVPFRNASGGGREVYFKEETEVDLE
DIISQNLPKIPLEVTIKSHWLAIDGIQPAIPENPPPISKDMQMQEVASAFANPAVCEVNI
TDFSQDNKSQLKDIKTKDSKDKKKVEDTKKLDFGKQEIKRFKPLVTHELSVEQQLFYKEI
TEACVGSNEVKRTEALNSLSNDPGLYQLLPRFTTFIAEGVKVNVGQHNLALLIYLLRMIK
ALMENSTLYIEKYLHELIPAVITCVVSKQLCPRPDFDNHWALRDFAARLLAQICKHFTTP
TNNIQSRVTKALCKTLFLDKAPAASHYGAVAGLAEIGLEAIKVILIPRLKNESDLILEAM
ENPSEKDAAEHLQALLVKHASIAIVKTRSPPDLQHQYMAEFGYLGGLIYNKVIQLRISLS
QAKTPTTPNAPSILAK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaggacaaggttttgatgaaaaaaccaaagaaattgttgacagtgcttttacc
agcgagataattaaggttatagttgaatcaaatagttatgataaacctcccgatgatgtt
ctacaatatttagctgataatataacgtttaaagttaaaaaagtaattcaagaagctgta
aaatttcagaacaaatctaaaagactaaaattaacttctcgtgatatagatcattcattg
aaagttcaaaatgtagaacctgtatacggttttagctcctccgattttgtcccattccgt
aatgccagtggtggaggaagagaagtttattttaaggaagaaacagaagttgatttagaa
gatattatatctcaaaatttgcctaaaatacctcttgaagtaacaatcaaatcacattgg
ttagcgattgatggaatccaacctgctattcctgaaaatcctccgcctatttctaaagat
atgcaaatgcaagaagttgcttctgcatttgcaaaccctgctgtttgtgaagtaaatata
accgatttttcacaagataataaatcacaattgaaagatataaaaactaaagattcaaaa
gataaaaaaaaagtagaagataccaaaaaacttgattttggaaaacaagaaataaaaaga
tttaaacctcttgttactcatgagctgtcagttgaacagcagttattttataaggaaata
acagaagcttgtgttggttcaaatgaggttaaacgaacagaagcattaaatagcctttca
aatgatcctggactatatcaacttctaccacgttttaccacttttattgctgagggtgta
aaggtgaatgtaggacaacataatttagctcttcttatttatttattaagaatgataaaa
gctttaatggaaaattctacattatacattgaaaagtatctacatgaacttattcctgca
gttattacttgtgttgtcagtaaacagctatgtccgcgacctgactttgacaatcattgg
gcacttagagattttgctgctagattattagctcaaatatgcaaacattttaccactccc
actaacaatattcaatctagggtgacaaaagctttatgtaaaacattgtttttagataaa
gctcctgcagccagtcattatggtgctgttgctggacttgcagagattggattagaggct
ataaaagttatacttattccacgtctgaaaaatgaaagtgatttaattctggaagcaatg
gagaatccatcagaaaaagatgcagcagaacatttacaagcacttctagttaagcatgca
tccatagctattgttaaaactcgctcaccccctgatttacaacatcaatatatggcggaa
ttcggttaccttggtggtctaatttataacaaagttattcaacttcgaatatcactatcg
caagcaaaaacaccaacaacacccaatgctccgagtattcttgctaaataa
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