Hydra vulgaris (swiftwater hydra): 100197630
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Entry
100197630 CDS
T01080
Name
(RefSeq) serine/threonine-protein phosphatase PP1-beta catalytic subunit
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100197630
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hmg01009
]
100197630
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100197630
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100197630
03041 Spliceosome [BR:
hmg03041
]
100197630
Enzymes [BR:
hmg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100197630
Protein phosphatases and associated proteins [BR:
hmg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
100197630
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100197630
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100197630
Spliceosome [BR:
hmg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100197630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
100197630
NCBI-ProteinID:
XP_047132717
LinkDB
All DBs
Position
5:complement(21630551..21654427)
Genome browser
AA seq
330 aa
AA seq
DB search
MAEAELNIDSVIARLLEARGKPGKPVQMTEAEVRGLCVKSREIFLSQPILLELEAPLKIC
GDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR
GNHECASINRIYGFYDECKRRFSIKIWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQS
MEQIRRIMRPTDVPDTGLLCDLLWSDPDKDIQGWGENDRGVSFTFGGDVVARFLNRHDLD
LICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDDTLMCSFQILKPAEKK
AKYQYGGLNSGRPITPPRNQTQNKKAKGAK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagcggaacttaatattgattcagttatagctcgtcttctagaagctcgagga
aaacctggcaagcctgttcagatgacagaggctgaagttcgtggactttgtgtcaaatct
cgtgaaatattcttgagtcagcctattttattagagcttgaagctccattaaaaatatgt
ggtgatatacatggccagtattcagaccttttacgtttattcgaatatggtggctttcct
ccagaggctaattatttatttcttggtgactatgtagatagaggaaaacaatcacttgag
acaatttgtttgcttttggcatataaaataaaataccctgaaaacttctttttgctaaga
ggaaaccacgaatgtgcaagtattaacagaatatatggcttttatgacgaatgtaagcgt
cgttttagcataaaaatttggaaaacatttactgattgctttaactgcttacctattgct
gctattgttgacgaaaagatattttgttgccatggaggcctctcacctgatttgcagtct
atggaacaaatcagaagaataatgcgacctacagatgtccctgatacaggtcttctatgt
gatttactttggtcggatcctgataaagatattcaaggatggggagaaaacgacagaggg
gtttcgtttacgtttggaggtgacgttgttgcacgtttcttaaataggcatgatttggat
cttatatgtcgagctcatcaggttgtcgaagatggttatgaattctttgcgaaacgtcag
ttagtgacattattctcagcacctaattattgtggagagtttgacaatgctggtggaatg
atgagtgttgatgatacattaatgtgttcttttcaaatattaaagccagctgaaaagaaa
gcaaaatatcaatatggtggattgaattctggtcgtcccatcacgccgcctcgtaaccag
acgcagaacaaaaaagctaagggtgcgaaatga
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integrated database retrieval system
