Hydra vulgaris (swiftwater hydra): 100197813
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Entry
100197813 CDS
T01080
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hmg01009
]
100197813
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100197813
Enzymes [BR:
hmg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100197813
Protein phosphatases and associated proteins [BR:
hmg01009
]
HAD phosphatases
Fcp/Scp phosphatases
100197813
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100197813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
100197813
NCBI-ProteinID:
XP_047135709
LinkDB
All DBs
Position
6:56163232..56220843
Genome browser
AA seq
458 aa
AA seq
DB search
MMDDERKEQIRAKIQSHVRAEEAAYRCVERLAVVECITKEEFRHILSIITLSHYQDITEE
RFVSKMCGYALCSNKISKVVKQKFHISTNSNKVYDMEERKRFCSLHCFKASKHLERQMQE
SPFCTTSTEKKITFIDEVVDSTPFVLDCEIKMMEMLKLTDDDKSYTEEQYIGDAGSSKNK
DFKSVYQKDSNPPTNLMKNTNQSTQKTKLKEKQAILIIPEIEKNVLPSKTGLKPDDLNTL
VELVEILKSWFTPKSLDYLFNTENINKNNLKKSVIKFDFTNMDNDNIEKKVDVGIMQNFN
QKAMGFLTRQPEWVSETVVSNKHLITKDDSENISTPPLIVDSKSQSVIRKRIVKEKLTSS
LKNLLTVVGMTITDLSELGFFSLVDTFRFTSKNIVLKPKQWHNIGLILLKLLSKNNHDLA
SSFDSRSFEVDELAKREGLITMDNLNFVVESIKNMKIT
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgatgaaagaaaagaacaaatcagagcaaaaattcaatcacatgttcgagca
gaagaagcagcctatcgttgtgttgaacgtttagctgttgttgaatgtattacaaaagaa
gaattcagacatattttaagcattataacgttgtcacattatcaagatattacagaagaa
cgttttgtttccaaaatgtgtggatatgctttatgtagcaacaagatctctaaggtagtc
aaacaaaagtttcatatttcaactaattcaaacaaagtctatgatatggaagagcgaaaa
cgattttgttcacttcattgctttaaagcaagtaaacacttggaaagacagatgcaagaa
tctcctttttgtactacatccactgaaaaaaaaattacatttattgatgaagtggtggat
agcacaccttttgtccttgattgtgaaatcaaaatgatggagatgctaaaactaactgat
gatgataaaagttatactgaagaacaatatattggcgatgcaggcagctcaaagaacaaa
gattttaaatctgtatatcaaaaagacagcaatcctccaactaatctgatgaaaaatacc
aatcaaagcactcagaaaactaaacttaaagaaaagcaagcgattttaatcataccagaa
atagaaaaaaatgttttacccagtaaaactggtttaaaaccagatgatttgaacacatta
gttgaattagttgaaattctgaaatcttggtttacacccaaatcattagattacttattt
aatacagaaaatataaacaaaaataatctgaaaaagtctgttataaaatttgattttaca
aatatggataacgataatattgaaaaaaaagtcgatgttggtattatgcaaaattttaat
caaaaagctatgggatttttaacaagacaacctgaatgggtatcggaaacagttgtatct
aacaagcatctgataacaaaggatgatagtgagaatatatcaactccacctttaatagtt
gactcaaagtctcagtctgttattagaaaaagaattgttaaagaaaagcttacatcaagt
ttaaaaaaccttttaactgttgttggaatgacaattacagatctctctgaacttggattc
ttttcacttgttgatacatttcgatttactagtaaaaatattgttttgaaaccaaaacag
tggcataatattgggctaattttattaaaattacttagtaagaataaccatgacttagct
tcttcctttgacagtcgatcgtttgaagttgatgaattagcgaaaagagaaggtcttatt
acaatggacaatttgaactttgttgttgaatccataaagaatatgaaaataacctaa
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