Hydra vulgaris (swiftwater hydra): 100197842
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Entry
100197842 CDS
T01080
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hmg03036
]
100197842
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100197842
Meiosis-specific proteins
Cohesin complex and associated proteins
100197842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
DUF2187
Motif
Other DBs
NCBI-GeneID:
100197842
NCBI-ProteinID:
XP_047126281
LinkDB
All DBs
Position
2:49934776..50019689
Genome browser
AA seq
1226 aa
AA seq
DB search
MPGYLEKLEIINFKSYKGKHLIGFSKFSAIIGPNGCGKSNMMDAISFVLGEKTSNLRVKS
VKELIHGAPIKQPVATTAQVSAHYIDYNKDGEKQETIFCRRIVGSGTEYRINGKLVANKE
YHSALEDIGILIKAKNFLVFQGAVESIAMKTPKERTAMFEKISGSGELIEEYDKKKQEML
TAEEDTTFSLNKKKGINAERKEARAEKEEAEKYKKLTQDLFDAKLQAQLFKLYYAEQDLK
NFEVELKEHNNELEKIKSRKVTVETQLKLKKSEGGKFSREIALKDKDISEKEAEISKKQP
LYLKAKQVTQHEIKKMEDANNAYNKHKKNADKQKDEIKDLEKSLIEIQKLAKAYEQEIGE
SQGQSLHLIGSQMAEYNQLKEMAGKETSEVQTRLDKINREQKGDIANLHQLNQRKLNLES
RLKELKEERAQLHQRVKDSCDYIAANEAKLSELNDQHNILNKNVNEANERYNQKCSLLEG
VELELGEAKADKNEDARSQERAETVKKLKELYPGVYGRLVDLCEPVHKRYAIAITKVLGK
YMDGIVVDTEKTGRECVQYMKEQSLPRETFMPLDTLKIKSTNEQLREIGGSAKLVIDIIK
YDPSCIKKALQFSCGNSLVCDTAEEARQVAFRGSERRRTVSIDGTLFEKSGVISGGLGAV
KIKAKRWDSKRIDQLKQKRDEYQAELKELQGERRKAPGLSELKSLIQGLEAKLKWTKRDK
ETIENQTMTRNEREMEVINSKIEEILPDIANFTESIKKREKEVQKIEKEKNVIEDQIFAS
FCLQIGVQNIRQYEETQLVAQQEKTEKMLQFQKQEGKLQNQIDYLKSCDHTEQMKKLEKK
IKESEVEIEKLKIEEKKLLKDIDINLNELDKWRQEIQVMKTNAEKKDADIKEAKKLLNVI
LKDESSVEKKKSFKERQIEEKRSDRHSLLKQCKMDDITIPFKKGSMNDIEASGNTLSQTD
DEMQGSQGSVTYNKENSVIIDYAKLKDEYKKLADEVEIKNVQQELTSTITSLESTISRIV
APNMKAVSRLDEVQNRLKETNDEFENTRKRAKKAKAEYEAIQKERYDKFMDAFEHVSQKI
DEIYKELSNNSSAQAFLGPENGDEPYLEGISYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYQPSPFFVLDEIDAALDNTNINRVAKYIKKQTNDHFQCIVISLKDEFYTKVDSVI
GVTADPDKDCTTTSTLTLDLTQFPES
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgcctggttacctcgaaaaacttgaaattataaactttaaatcgtataaaggaaagcat
ttgattgggttttctaaattttccgctattattggaccaaatggatgtggaaagtcaaac
atgatggatgctataagttttgttcttggggaaaaaacttctaatttgagggtgaagtca
gttaaggaacttattcatggagcacccattaagcaacctgtagcaacaacagcacaagtg
tcagcacactacattgattacaacaaagatggagaaaagcaggagaccattttttgtaga
agaattgttggttctggtacagaatatcgtataaatgggaaattggttgcaaataaagaa
tatcacagcgcacttgaggatattggaattctaattaaagctaaaaattttcttgttttt
cagggagcagtggaatcaattgcaatgaaaacaccaaaagaaagaacagctatgtttgaa
aaaattagtgggtctggtgaattgattgaagagtatgataagaagaagcaagaaatgcta
acagcagaagaagatacaactttttctttaaacaaaaaaaagggcattaatgcagagcga
aaagaagcgagagctgaaaaagaggaagctgaaaaatataaaaaattaacacaagactta
tttgatgcaaagcttcaagctcaactctttaagctatattatgctgaacaggatttaaaa
aattttgaagttgaactaaaagaacacaacaacgagttagagaaaattaaatcacgcaaa
gttactgttgaaactcaattgaaattaaagaaaagtgaaggcggaaaattttcaagagaa
attgctcttaaagataaagatatttcagaaaaagaagcagagataagcaagaagcaacca
ttgtatttaaaagcaaagcaagtgactcaacatgagataaagaaaatggaggatgctaat
aacgcgtataacaaacataagaagaatgcagataaacaaaaggacgagataaaagatttg
gaaaagtctcttattgaaattcaaaaattagctaaagcatatgaacaagaaattggagaa
agtcagggccagagcttacatcttattggttctcagatggctgagtacaatcagttaaaa
gaaatggctggaaaagaaacaagcgaagtgcaaactagacttgacaaaataaatcgagaa
cagaaaggagacattgcaaatttgcatcaattaaatcaacgtaaacttaatctcgaatct
agattaaaagaactcaaagaagaacgtgctcagctgcaccaacgtgttaaagactcttgt
gattatattgcagctaatgaagcaaagttaagtgaacttaatgaccaacacaacatactc
aataaaaatgtcaacgaagcaaatgagcgttataaccagaaatgttctctgttagaagga
gtggagcttgaattaggagaagcaaaggctgataagaatgaagatgcaagatcacaagaa
agagcagaaactgttaagaaacttaaagagttgtatcctggggtttatggaaggcttgtt
gatctttgtgaacctgtccataaaagatatgctatagcaataacaaaagtgcttggtaaa
tatatggatggcatagttgttgatactgaaaaaactggaagagagtgtgttcagtacatg
aaagaacagagtttgcctagagagacatttatgcctcttgatacattgaaaatcaagtca
acaaatgaacagcttcgtgaaattgggggctctgcaaaacttgtaattgacattatcaaa
tatgatccttcttgcataaagaaagccttacagttttcttgtggaaactctctggtttgt
gacacagctgaagaagcacgccaagtggcgttccgtggttcagagcgaagaagaactgtc
tcaattgatggcactttgtttgagaagtcaggagttatctcaggtggattaggagctgtt
aaaataaaagctaaacgttgggattcaaaaagaatcgatcagctgaaacaaaaaagagat
gaataccaagcagagttaaaagaattacagggagagcggcggaaagccccaggactttca
gaactaaaatctctcattcagggtcttgaagcaaaattaaaatggaccaagcgtgataag
gagacaattgaaaatcagacaatgactcgaaatgagcgagaaatggaagtgattaattca
aaaatagaagagatactacctgatatagcaaatttcacagaatcaattaaaaagcgtgaa
aaagaagtacaaaaaattgagaaagaaaagaatgtaattgaagatcagatatttgcttct
ttctgtttacaaattggtgttcaaaatatccgacagtatgaagaaacacagcttgttgca
caacaagagaaaactgaaaaaatgttgcaatttcaaaaacaagaaggaaaattgcaaaac
cagattgattatttgaagtcatgtgaccacactgaacaaatgaaaaaacttgagaaaaaa
attaaagaaagtgaagttgaaattgaaaagttaaaaattgaagaaaaaaaactccttaag
gatatagatataaatttaaatgagttagacaagtggcgacaagaaatacaagtcatgaaa
actaatgctgagaaaaaggatgcagacataaaagaagcaaagaaacttttaaatgtcatt
ttaaaagatgaaagttcagtggaaaagaaaaaatcttttaaggagagacaaatagaagag
aaacgtagtgacagacacagccttcttaaacaatgcaaaatggatgatattactattccg
tttaaaaaaggttctatgaatgatatagaagcttctggaaatacgttaagccaaactgat
gatgaaatgcaaggaagtcagggctctgtaacatacaataaagaaaactcagtcatcatt
gattatgctaaactcaaagatgaatacaaaaaactggctgatgaagttgaaataaaaaat
gttcaacaagaactaacatctacaatcacttcacttgaaagcacaatttcgcgcattgtt
gcacctaacatgaaagctgtttcaaggttggatgaagttcaaaatagacttaaggaaaca
aatgacgaattcgaaaatacgaggaagcgagcaaaaaaagctaaagctgagtatgaggca
atacaaaaagaaaggtatgacaagtttatggatgcattcgaacacgtttctcagaaaatt
gatgaaatatataaagaactatcaaacaactctagtgcacaagctttccttgggcctgag
aatggtgatgagccttatctcgaagggattagttataattgtgttgcaccaggtaaaaga
tttcgacccatggataatttatcaggtggagaaaaaactgttgctgctttggctttatta
tttgctatccacagttaccaaccctctcctttctttgtacttgatgaaatagatgctgct
cttgataacacaaacattaacagagttgcaaaatatataaaaaaacaaactaacgatcat
tttcaatgcatagttatatctttaaaagacgagttttatactaaagttgatagtgtaatt
ggggtgaccgctgatcctgataaagattgtacgacgacgagtacacttactcttgatttg
actcaatttccagaatcataa
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