Hydra vulgaris (swiftwater hydra): 100197993
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Entry
100197993 CDS
T01080
Name
(RefSeq) ras-related protein Rab-5C
KO
K07888
Ras-related protein Rab-5B
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04137
Mitophagy - animal
hmg04144
Endocytosis
hmg04145
Phagosome
hmg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100197993
04145 Phagosome
100197993
04137 Mitophagy - animal
100197993
04148 Efferocytosis
100197993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
100197993
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hmg04147
]
100197993
04031 GTP-binding proteins [BR:
hmg04031
]
100197993
Membrane trafficking [BR:
hmg04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
100197993
Endosome - Lysosome transport
100197993
Exosome [BR:
hmg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100197993
Exosomal proteins of other body fluids (saliva and urine)
100197993
Exosomal proteins of colorectal cancer cells
100197993
Exosomal proteins of melanoma cells
100197993
GTP-binding proteins [BR:
hmg04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
100197993
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
MMR_HSR1
GTP_EFTU
Gtr1_RagA
MCR_beta
AAA_16
Motif
Other DBs
NCBI-GeneID:
100197993
NCBI-ProteinID:
XP_047138478
LinkDB
All DBs
Position
8:29353809..29406108
Genome browser
AA seq
213 aa
AA seq
DB search
MSRSGTPQRPNGAPQGKIQPFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
TVCFDDTTVKFEIWDTAGQERYHSLAPMYYRGSQAAIVVYDITNTDTFSRAKSWVKELHR
QASANIVISLAGNKADLGNKRMVDYEEAHAYAEENGLLFMETSAKTASNVNELFLAIAKK
LPKNTDQPGPGGPSRRGIELTENPEPPKSGCCK
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagatctggaacgccacaaagaccaaatggagcacctcagggaaaaattcaacct
tttaaactagttttattaggtgaatctgcggttggaaaatcaagtttagttttaaggttt
gtcaaaggccaatttcatgaataccaggaaagtactattggcgctgcatttttaacacaa
acagtttgttttgatgatactacagtaaagtttgaaatatgggatactgctggccaagaa
aggtatcatagtttagcaccgatgtattatagaggctcccaagctgctattgttgtatat
gatataacaaatacggatacattttcaagagcaaaaagttgggttaaagaattacatcga
caagctagtgcaaatattgttatttctcttgctggaaataaagctgatcttggaaacaaa
agaatggtagactatgaggaagcacatgcttatgcggaggaaaacgggcttttatttatg
gaaacctctgctaaaactgccagcaacgttaacgaactatttttagctattgctaaaaaa
ttacctaaaaacactgatcaaccaggacctggtggtccatcacgtcgtggaatcgaactg
acggaaaatccagaaccacctaaatctggttgttgcaaatag
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