Hydra vulgaris (swiftwater hydra): 100197996
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Entry
100197996 CDS
T01080
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hmg01009
]
100197996
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100197996
Enzymes [BR:
hmg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100197996
Protein phosphatases and associated proteins [BR:
hmg01009
]
HAD phosphatases
Fcp/Scp phosphatases
100197996
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100197996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
BSH_Fcp1
Biotin_lipoyl
BSH_YhbJ
BSH_LcnD
LIG3_BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
100197996
NCBI-ProteinID:
XP_002161785
UniProt:
T2M2T6
LinkDB
All DBs
Position
1:50975980..50984825
Genome browser
AA seq
718 aa
AA seq
DB search
MATRDLVLSCISKSKILKWHVKPNDSVKKDNIIATYVFTEKIPDSSSFIVQRKLKAKFNG
KVVDLSVKPNEDVSRGQVVARLIQQDCEHSTLMKDMCCDCGADLRKEAGIPGNLVEATTA
SVPVVHNILELKVSVEEAEKLAKYDEQQLLRARKLVLVVDLDMTLIHTTVEPTPKNTKDV
FSFKLPGHQYEYHTKLRPGARKFLESISKFYELHIFTMGSRLYAHTVAKCLDPDGKFFAH
RIRSRDEFINSFSKFHDLKALFPCGDHMVCIIDDREDVWNYAPNLITVKPYKFFKGGDDI
NDPFQSPGLSVNSEVCEKKVADDNQMKDSCDEKIKTANTTADEDPALCSVSSEKNDSNKK
ISLIESSSNENTLDKANGVENRTDNDDYLFYLDEILERVHYSFYSTLDAVKAKGGAASKD
TEITKFCTFGTMNPDIRVILPELRRQTLKGCNIVFTGVIPTNCPLEKSKAWKTAVSLGAR
VTSEVVGKEEDGLRTTHVVAARHGTHKAHKAYKSPDINLVNPNWLWCSSERWEWAEESIF
PVPVVENGTPGSSRQVTPQHNSFESFGKAHSKKKLSPLAEEGFEMPKDNTNLVNSNHPLS
SLSKSDIDEMDKEVNELMSIDDDSNSSCAENKFVCLSDPGKRKRPVSDDLNLTYLSKKLL
KSVGDNDGEDEDITDHSSSSSNEDDYSSSSSSSSSDSDSSSENGDQLRTLLDADMVEC
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaagagatcttgtactttcttgtatatctaagtcaaaaatattaaaatggcac
gtcaaaccaaatgattctgttaaaaaagataatattattgcaacatacgtttttacagag
aaaattcctgactcttcgagctttatagttcaaagaaagctaaaagcaaaattcaacgga
aaagtagttgacctttctgttaaacctaacgaagatgtttcacgtggacaagtggtagct
cgcctcatacagcaagattgtgaacacagtactctaatgaaagatatgtgctgtgattgt
ggagcagatttaagaaaagaagcgggaataccgggtaatctagttgaagcgaccactgct
tctgttccagttgttcacaatattcttgaacttaaagtcagtgttgaggaagctgaaaag
ttggccaagtatgacgaacagcagttattgcgcgcacggaagttagttcttgtagtagat
cttgatatgacactaattcataccacagttgaacctactccaaaaaatacgaaggatgtg
ttttctttcaagttgcctggtcaccaatacgagtatcacacaaaattaagaccaggagca
agaaagtttttagaaagtatctcgaagttttatgaattacatatatttacaatgggttct
cgtctgtatgcacatacagttgctaagtgtcttgatccagacggcaagttttttgctcat
agaatacgttctcgtgatgagtttatcaacagtttttcaaagtttcatgatctcaaagct
ctatttccttgtggagatcacatggtttgtattatcgatgaccgtgaggatgtttggaac
tatgctcctaatcttattacagtaaaaccgtataagttttttaaaggaggtgatgatata
aacgacccctttcaatctccaggtctctctgtaaatagtgaggtttgtgagaagaaagtt
gcagatgataatcaaatgaaagattcttgtgatgagaaaataaaaactgctaatactact
gcagatgaagatcctgctctttgtagtgttagtagtgaaaaaaatgattctaataaaaaa
atatctcttatagaatcttcttcaaacgaaaacactcttgataaagcgaatggagtcgaa
aatcgtacagataatgatgattacctattctatctggatgaaattcttgaacgtgttcac
tattccttttattcgacgcttgatgctgtaaaagctaaaggaggtgccgcttctaaagac
acagaaatcactaaattttgtacatttggcactatgaatcctgacataagagtaatttta
cctgagttaagaagacaaacattaaagggttgtaacatagtctttacaggcgtcatacct
actaattgtcctttagagaaaagtaaagcatggaaaactgctgtcagtttaggtgctcgg
gttacttctgaagttgtaggtaaggaagaagacggactgcgtactacacatgtagtggct
gccaggcatggtactcataaagctcataaagcatataaatcgccggatattaatttggta
aacccgaactggctttggtgcagtagcgagcgatgggaatgggcggaagaaagtatattt
cccgttccagttgtagaaaatggaacgcctggatcgtctcgacaagttacacctcagcat
aactcttttgaatcgtttggaaaagctcatagtaagaaaaagttatctcctttagcggaa
gaaggttttgaaatgccaaaagacaatacaaatttagtaaatagtaaccaccctctgtca
tctttatctaaaagtgatatagatgaaatggataaagaagtaaacgagttgatgtcaatt
gatgacgatagtaactctagctgcgcagaaaataaatttgtgtgtttatctgatccggga
aagaggaagcgcccagtcagtgatgatttaaatctaacgtatttaagtaaaaaactcttg
aaatcagtaggagataatgatggagaagacgaagatataactgatcattctagttctagt
tctaatgaagatgattattctagctctagttcgtcctcatccagtgattcagacagcagc
tctgaaaatggagatcaactaaggacattgctagatgctgacatggttgaatgttga
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