Hydra vulgaris (swiftwater hydra): 100198041
Help
Entry
100198041 CDS
T01080
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100198041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hmg04121
]
100198041
Enzymes [BR:
hmg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100198041
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
HECT type E3
100198041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
100198041
NCBI-ProteinID:
XP_047123952
LinkDB
All DBs
Position
14:complement(28994120..29056267)
Genome browser
AA seq
1025 aa
AA seq
DB search
MYSFDGQHKTGLKVSLGGASKKIDKKSLLQSAKDERTKRELLRRQNISALKIQSWYRGIT
VRRCISAKERDVFDLLIKNEGCSDSLIVLIKKLCCFYKASIDYQRLIIVCQSVLKLNSSK
QLQKLLLNDEVGWVLKIKKLLFICCRSLEIPDINIAIPLRMLEVFTDCQSFICFGQQKAE
RTSSSITLFLVQKGYFKYLRKLINARVPSDIEPSANPPTPFSGALCDLVLKATRINLLNN
NDVVNESNTLKLYSALIEDLLSPPMTSQICYFLIPSLGKSFPINHLFLKAMASSSSSFSI
WSLYAHLTFFEYQLGNLNSKDLSSFIGSIKLMIKYLCRKKDEILVKDDSDSDSSNDNDDM
EISTSSSTINEQHCFNYVYERCMDIMNEKHVVSSFLHALEDRFISGYVVDDLCHIAFHFL
FKLHIQVHKSRFLNSLAFCKQFLRLCWSHLLRPVTSITGKQTQLIFHLSVSSNTVYVKES
LRLLTVFSSLFKYALFSIYDFDFYSTNADTCQSLMPFSLAEVVEMSTIVRDSILGLIMLM
YPESKTVETKFYSKCVFCCQMATAFIKHLYARDCRHQFCPEKHWLSDRAAISQENLNVSS
FLEEQTAEEVSKPGLSLLNLRNLAVLKYIPFAVPFLQRVRIFQRILSEDKKESQNIFQNV
LPSHSINITVNRKYLYQDAYDQLSQDRADDIKKVIRIHMINAQGLDEAGIDGGGVFREFM
SQLLRSGFDPSIGFFKTTSQQLLYPNPDISLIYPDYLKHLHFLGRMLGKVIYESMMVELP
LADFFLCKLLNKGGSDVDIHHLESLDPELYKNLLYLKNYKEDVEELSLSFTVANNEYGET
KVLELKPGGKDISVTNSNKIEYIHLMADYRLNKQIRSHCNAFRSGLSDVINIEWLQMFDQ
RELQILISGAQIPIDIEDLRRNTSYSGSFTAEDPYIEEFWKILEGLSDHQKRLFLKFVTS
CSRPPLLGFSELYPRFCVHGGGEEDRLPTASTCMNFLKLPVYKSIDLLKTRLIYAIEAEA
GFELS
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtatagctttgatggacaacataaaactggtttaaaagtatcacttggaggagcttct
aaaaagattgacaaaaagtctttactacaatctgcaaaagatgaaagaactaaaagagag
ttactaagacgacaaaacatatctgcattaaaaattcaatcatggtaccgtggaattact
gtcagaaggtgcattagtgcaaaagagcgagatgtgtttgatttgctaataaaaaatgaa
ggatgctcagattctttgattgttctcattaaaaagttgtgttgtttttataaagcaagt
attgattaccaaagactgataattgtttgtcagtctgttctaaagcttaattcatctaaa
cagctacaaaaacttttattgaacgatgaagtaggttgggttctaaagataaaaaagctt
ctttttatctgctgcagatctcttgaaataccagatattaatatagcaataccacttcgt
atgctagaagtatttactgattgtcagtcatttatatgtttcggtcaacaaaaagctgag
agaacatcttcatctattactttgtttcttgtacaaaaaggttattttaaatatttacgc
aaactgattaatgcacgagtaccttcagatatcgagccctctgctaatcctccaacacca
ttctctggtgctctgtgtgatcttgttttgaaagctacacgaattaacctattgaacaat
aatgatgttgtaaatgaatccaacacactaaaactttattctgcgcttatcgaagactta
ttgtcaccacctatgacttctcagatttgttattttttgattccatcacttggaaaaagt
tttccaattaatcatttgtttttaaaagccatggcaagttccagctcttcctttagtata
tggagtttatacgcacatctaacgttttttgaataccaactaggtaatttaaattcaaaa
gatttatcatcttttattggttctataaagttgatgatcaagtatttatgtcgtaagaaa
gatgaaattttggtcaaagatgacagtgatagcgattcaagtaatgacaatgatgacatg
gaaatatcaacaagttcatctactatcaatgaacagcattgttttaattatgtatatgag
cgatgcatggatatcatgaatgaaaagcatgttgtatcatcttttttacatgcacttgaa
gacagattcatatctggatacgttgttgatgatttatgccatattgcatttcattttttg
tttaaacttcatatccaagttcataaatctagatttctaaatagtctagcattttgtaaa
cagtttttgcgtctttgctggagtcatttgctgcgtcctgtaacttccattactggaaaa
caaactcagctaatttttcacttgtcagtgagtagcaatacagtttatgtcaaagaatca
ttgcgactattaacagtcttcagttccttattcaaatatgcacttttttctatatatgac
tttgacttctattctacaaatgctgacacctgccaatctttaatgccattttctttggca
gaggtggtggaaatgtcaactattgtcagagactcaattttaggtttgatcatgttgatg
tatcctgaaagtaaaacagttgaaactaaattttattccaaatgtgtattttgttgccag
atggcaacagctttcattaaacatctttatgctcgagactgtcgtcatcaattctgtcca
gaaaaacattggttatcagatcgtgctgcaattagtcaagaaaatttaaatgtgagttct
tttttggaagagcaaacagcagaagaagtatcaaaacctggactctcattgcttaattta
cgaaatttggcagtgctcaaatacataccgtttgctgttccttttttgcagcgtgttagg
atatttcagcgtattttgtctgaagataaaaaagagagtcaaaatatatttcaaaatgtt
ttaccatcgcatagtatcaacataacagtaaacagaaaatatctatatcaagatgcctat
gaccaactttcacaggatcgagcagatgatattaaaaaagttatcagaatacatatgatt
aatgcgcaagggttggatgaagcaggtatagacggaggtggtgtttttcgagaattcatg
tcacaacttcttcgcagtggttttgatccaagcattggcttttttaaaacaacttcacag
caacttctctatcctaaccctgacataagtcttatttatccagactatttaaagcattta
cattttcttgggcgaatgttgggaaaagttatatatgaatcaatgatggtggaactacct
ttagctgatttttttttatgtaagttattaaataaaggtggttctgatgttgacattcat
catctggaatcattagatcctgaattatataaaaatttattatatttaaaaaactataaa
gaagatgtggaggaactttcattaagttttactgttgcaaacaacgagtatggagaaaca
aaagttcttgagttaaagcctggtggaaaagatatatctgttactaattctaataaaatt
gaatacattcaccttatggctgattacagattgaataagcaaatacgatcgcactgcaat
gcttttcgctctggcttgtccgatgttataaatatagaatggcttcagatgtttgatcaa
agagaactacagattttgatatctggtgcacaaataccaattgatatagaagatttaaga
cgtaatacaagttattctggttcatttactgctgaagatccatatatagaagaattttgg
aagattttagaagggcttagtgatcatcaaaaaagactttttttgaaatttgttacaagt
tgttccagacctccattacttggtttttcggagttatatccacgtttttgtgttcatggg
ggaggtgaggaagatcgtttaccaacggcaagtacatgcatgaattttttaaaacttcca
gtgtataaaagtatcgatttacttaaaacaagactaatatatgctatcgaagctgaagca
ggttttgagttgagttag
DBGET
integrated database retrieval system
