Hydra vulgaris (swiftwater hydra): 100198211
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Entry
100198211 CDS
T01080
Name
(RefSeq) protein strawberry notch homolog 1
KO
K26273
protein strawberry notch
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hmg03036
]
100198211
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100198211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-GeneID:
100198211
NCBI-ProteinID:
XP_047142683
LinkDB
All DBs
Position
10:16435102..16476908
Genome browser
AA seq
1461 aa
AA seq
DB search
MDDILSAALGQSGLNSSFLENQDGDNGGFNVNGAEIFPVVNIPTHVKSIIPPTNIGYDIG
DDLTEFLCMLTDSVNDIKQNTNVNANTNSNGIKHVNTTTNESEAITGDVGEKEMLDYFFK
SDEEDEESVPSPATENTSVLFHPINMSSMFQTQKTQKNSTLSVQFPKLVSSKTIVTLPSV
NNSEFFQNHNIIKNSFKTKEGKQIISNNFPAYDTLSPRSVVMNTPNKTVKKFQNKKSPPG
SSGKPLTFANPKSPSDIEKKRQSIQKVLASPNLTAREKQFIMKSAISHNINADAIQLPSS
PKSISSVLKNSSTLSPSNEYEEDDEDENELAHTDTFAEYMPSKVKVGFRHPDPVVETSSM
ASVPPPDVWYNLLLPQDVVLERKLSALQLESVVYASQQHEQLLPNGKRAGFLIGDGAGVG
KGRTVAGIIYENYLHGRKRSIWLSVSNDLRFDAMRDLRDIGCRAKVLPLNKFKYDEKITS
KVNGKFKKGCIFSTYSALIGETSGNSRFKSRLDQLLHWCGEDFDGPIILDECHKAKNLMP
AGSSKPTKTGITVMKLQDMLPKARVVYCSATGASEPKNMAYMNRLGLWGKGTAFKEFTDF
IQSVEKRGVGAMEMVAMDMKLRGMYIARQLSFSGVTFDIKEVKLCASFIEMYDASVKLWL
DARDKFETAADIVGLDSKGKKTMWGQYWSAHQRFFKYLCIAAKVKSAVEIAKEAIEKGKC
ILFGLQSTGEARTLDQLDEMGGELNDFISTTKGVFSTLVEKHFPTTVDSKANHNNTDCKR
KRDWKKSHKQKRRRYQDGVEFMSSSDSSDSENESKNEASDLILSDSSNESEEEDFSSGSL
SESDEDAWMKDSSEKRSKKSIKKLTIKCSVDPSMSALAAAGLNVGHKYSWANSNENSLDV
TKNMKSNRAKTATPSGLSLRLNNVKQVSSHLDQVQHCQQMKKNLLDQLDVIAPYLPPNTL
DELIDELGGPEHVAEMTGRKGRIVAKPDGTFGYEPRSKDDVPLELLNVAEKKRFMDGEKL
IAVISEAASSGISLQADRRVNNQRRRVHITLELPWSADKAIQQFGRSHRSNQVSAPEYLF
LISELAGEQRFASIVAKRLESLGALTHGDRRATESRDLSKYNIDTKYGRQALDIVLKSVI
GQEKPIVPSPTGYHGNFFEDVKISLVGIGLIQKDERTGSCTLADKDCTNISRFLNRILGM
SVSLQNNLFQYFTDTLSEIIKEAKRSGRWDEGIVDIGSQGEAVVQVDVQTFFCPSTCGEV
TTELRTVSVERGLSFSKAVEMNAKSHDPNEGFYISKQLRNGKNTAALVLKPHGKLLYAIY
RPNIGLAQKFESLEDIQNKYEKVKPSDVEVIWNEQYEYSEKNCSHAFLRGYCKRKIVGLP
CEVGTRKRTCYILCGSVLSVWSKVETLLSCQPGSASKMQIIRLKLDNGVKLVGMSIPSNC
VEPLIRVLSSDLRVERKRPDY
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggatgatatattgtctgcagctctcggacaaagtggtttaaattcatcatttttagaa
aaccaagatggtgataatggcggttttaacgtaaatggggcagaaatcttccctgttgtt
aatattcctactcatgttaaatcgattatacccccaacaaatataggttacgatattggt
gatgatctaacggaatttttatgtatgttaacagactcagtaaatgatataaaacaaaac
acaaatgtaaatgcaaatactaacagtaatggtattaagcatgttaatacaactactaat
gagagtgaagcaataactggagatgttggagaaaaagaaatgcttgattatttttttaaa
tcagatgaagaggatgaagaatctgttccttcgcctgctaccgaaaatacttctgttctg
tttcaccccataaatatgtcatctatgtttcaaactcaaaaaactcaaaaaaattcaact
ttaagtgtgcaatttcctaaattggtttcatcaaaaactattgtaacacttcctagtgtt
aacaactctgaattttttcagaatcataatataataaaaaactctttcaaaactaaagag
ggaaaacaaataatttcaaataattttccagcttatgacacactatcccctagaagtgtt
gttatgaatacaccaaataaaactgttaaaaagtttcagaataaaaaatcaccacctgga
tcatcaggtaaacctttgacatttgctaatccaaaaagcccttctgacattgaaaaaaaa
agacaatcaattcaaaaagttttagcatctccaaatttaacagcaagagaaaagcaattt
ataatgaaaagtgcaatatctcataatataaatgcagatgcgattcagctcccttcaagt
ccgaaatctatttcttcagttctgaaaaactcatcaactttgtctccatcaaatgaatat
gaagaagatgatgaagatgaaaatgaattagcacacacagatacttttgctgaatatatg
cctagtaaagtaaaagttggttttagacatccagatcctgttgttgaaactagttcaatg
gcaagtgttccacctccagatgtctggtacaatcttttattgcctcaagatgttgttttg
gaacgtaaattgtcagctcttcagcttgaatctgtggtatatgcatcgcaacaacatgag
cagctactaccaaatggcaagcgagcaggttttttgattggagatggtgctggtgttgga
aaaggaagaactgttgccggtattatctatgaaaactatcttcacggtcgtaaaagatca
atttggctcagtgtttcaaacgacttacgctttgatgcaatgagagatcttagagatatt
ggatgccgagcaaaagttctaccattaaacaagtttaaatatgacgaaaaaataacatct
aaagttaatggaaagttcaaaaagggttgcatcttttctacatactcagcattgataggt
gaaacaagtggcaactcccgtttcaaaagtcggcttgatcagcttcttcactggtgtggg
gaagattttgacggaccgataattttagacgagtgtcacaaggctaaaaacttaatgcct
gctggttcttcaaaaccaacaaagacaggtattacggtgatgaagttgcaagatatgttg
ccaaaagcaagagttgtatattgttctgctacaggtgcatctgaaccaaaaaacatggct
tatatgaatagacttgggttgtggggaaaaggaactgcttttaaagagtttaccgatttc
attcaatctgttgaaaagaggggtgttggggcaatggaaatggttgccatggatatgaag
ctgaggggcatgtatattgcaaggcagttaagcttttctggagtaacctttgacataaaa
gaagtaaaactttgtgcttctttcattgaaatgtatgatgcttcagttaagttatggctt
gatgctagagataagtttgaaacagctgctgatattgttggattagatagcaagggaaaa
aaaactatgtggggtcagtattggtctgcccatcagcgattctttaaatatttgtgtatt
gcagctaaagtaaaatctgccgttgaaattgctaaagaagcaattgaaaaaggaaagtgt
atactctttggacttcaatccacaggagaggcacgtacacttgaccaactcgatgaaatg
ggtggagagttaaatgattttatttcaacaacaaaaggtgtctttagtacattagttgaa
aaacactttcctacaactgtggattctaaagctaatcacaataacactgattgtaaaaga
aagcgtgattggaagaaatctcacaaacagaaacgacgacgatatcaagatggtgtcgaa
tttatgtcatcaagtgactcaagtgatagcgaaaatgaatcaaaaaatgaggccagtgat
cttatattgtctgatagttcaaatgaaagtgaggaagaagacttttcttcaggaagcttg
tctgaatcggatgaggatgcttggatgaaagactccagtgaaaaaagatctaaaaaatca
attaaaaaacttacgattaaatgctctgttgatccaagtatgagtgctcttgctgctgct
gggctaaatgttggtcacaaatattcatgggcaaattcaaatgaaaatagccttgatgtt
acaaaaaatatgaaaagtaatcgcgctaagacagcaacgccttcaggtttatctctgcgt
ttaaataatgtaaaacaagtgtcatctcacctggatcaagttcaacattgtcaacagatg
aagaaaaatttacttgatcaacttgatgttattgcaccgtatctgcctcctaacactcta
gatgaacttatagatgaactaggaggtcctgaacatgtagctgagatgacaggcagaaaa
ggtagaattgttgctaaacctgatggaacctttggctatgaaccccgcagtaaagacgat
gtaccgctagagttgttaaatgttgctgaaaagaagcgttttatggacggagagaaattg
attgctgtgatttctgaggctgcaagttctggaatctctttacaagctgacagaagagtc
aataatcaaagaagacgtgttcacattactttagaattaccttggagtgcagacaaagct
attcaacaatttggtcgaagtcatcggtctaaccaggtttcagctccagagtatcttttt
ttgatatctgaacttgctggtgaacaaagatttgcttcaattgttgcaaaacgactagag
agtttgggagctctaacacatggagacagaagagcaactgagtcaagagatttgagcaag
tacaacattgataccaagtatgggcggcaagctcttgatattgttttaaagtcagtaatt
ggtcaagagaaaccaatagtacccagtccaactggctaccatggcaacttttttgaagat
gtcaagattagtttggttggcattggactgattcagaaagatgaacgaacaggttcttgt
actttagctgacaaagattgtacaaatataagtcgtttcttaaatcgaatacttggaatg
tctgtttccctacagaacaatttgtttcaatactttactgacactttatcagaaattatt
aaagaagcaaaaagaagtggaagatgggatgaaggaattgttgacattggttctcaaggt
gaagctgtcgttcaagttgatgttcagacatttttttgtccttcaacatgtggtgaagta
acaactgaacttcgaactgttagtgttgaaagaggcttgtcattttcaaaagctgtggaa
atgaatgcaaaatcccatgatccaaatgaaggattttatatttcaaaacaacttagaaat
ggtaaaaatacagcagcacttgttctcaaacctcacggaaaacttctctacgcaatatat
agaccaaacattggacttgctcaaaagtttgaatccttagaagatatacaaaacaaatat
gaaaaggtaaaaccaagtgatgttgaagtcatatggaatgagcaatatgaatactctgaa
aaaaattgctctcacgcctttttacgtggatactgcaaacgaaaaatagtcggacttcct
tgtgaggtcggcacgcgaaaacgtacttgttatattttatgtggttcagtattgagtgta
tggtctaaagttgaaactttgctttcgtgtcagcctggatctgcctcaaaaatgcaaata
attaggctaaaacttgataatggtgtcaaactcgttggcatgtctatacccagcaattgt
gtcgaaccacttattcgtgttttgtcctccgatcttcgagttgaacgaaaaagacctgat
tattag
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