Hydra vulgaris (swiftwater hydra): 100198679
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Entry
100198679 CDS
T01080
Name
(RefSeq) uncharacterized protein LOC100198679 isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100198679
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
100198679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
KH_N4BP1_1st
UBA_6
KH_N4BP1_2nd
KH_1
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
KH_PARP14_8
zf-CCCH
PRORP
Motif
Other DBs
NCBI-GeneID:
100198679
NCBI-ProteinID:
XP_002165851
UniProt:
T2M6F1
LinkDB
All DBs
Position
3:26510436..26515510
Genome browser
AA seq
775 aa
AA seq
DB search
MDKNKLSTLDVFIKDSSIDRVKLFAEHVKKLFFVELKFTSAKGKQFMHMAGVWLEIQGQE
YENVVKAREYVKGLSSPEEVVRISFPPPVYYLLCGTNGEKLSNLEKETTANIAFNSLEEV
EISGSISSVTKASCFVEEIVKKFIDEKISETDTDDSASSIGRDSGIYIKCNSGSDCFHDE
NSDISYGTRSSILTVDEDLSDDISLSRDSLLDREELNRSLSEKGFNDIIDSDLMEYARKL
GYSDSQVKSAMKKLGPDTVDQNELLHELIKAANSQRDGISFENSSDLSTFYESVTTPSNT
GTAFLRHVVVDGSNVAMSHGNNQVFSCRGIAIVVNWFQKRGHAVTVFVPNWRNESSKQNT
PIIDQEILTKLSDDGVLSFTPSRRVGGKLIQCYDDRYIVRLAVETDGIIVSNDHFRDIQR
DMHEWKDFINKRLLMYTFAGDIFMPPDDPLGRHGPTLNEFLKKSVEKKGIQFCPYGKKCT
FGPKCKFYHPERRFTGSFMKKPLPPLPNQPQETNSGSRPRSDPGQSFSAALDGKQRPISL
PNLEQLYVSPPHSLHRFIYVQNNDFSRPISGPPFQGNINISQNINAIYNINNEISFSMEH
SHKQKFSGDHFTPQYLLVPPHCRGELGSNKTNSNIQTNCDYVGRPLSSDFSSRPSSGEYS
YSSESRPHSGEYGSNSRLSSEDFSPMQQWSMGLYQRQYNHGNFYPMKNYYRNTPTLPETQ
EETRHAPGSLKIEIVEQLRELFPDQYDKILWVLRTYPEIKNIDDAIPIMKECLNT
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaataaactgtcgactttagatgtatttataaaagattcgagtattgacaga
gtaaaactttttgctgaacatgttaaaaaactgttttttgttgaacttaaattcacatca
gcgaaaggcaagcaatttatgcatatggctggagtatggctggaaatacaaggccaagaa
tatgaaaacgttgttaaagcaagggagtacgtgaagggcttgtcatcaccggaagaagtt
gtgagaataagtttccctcctccagtttattatttactgtgtggtacaaacggagaaaag
ttatcaaatcttgagaaagaaacgactgcaaatattgcatttaactctttggaagaagtt
gaaatatctggctcaatatcaagcgtaacaaaagcttcgtgttttgttgaagaaatcgta
aaaaagtttattgacgaaaaaatttctgaaactgatacagatgattcagcatcgtctatt
ggaagagacagtggaatatatataaaatgtaatagcggctcggattgttttcacgacgaa
aactctgatatatcttacggaactcgatccagtattttaactgttgacgaagatttaagt
gacgatataagtttaagtagagattcactgcttgatagagaagaattaaatcgaagtctt
tcagagaaaggcttcaacgatattattgatagtgatctaatggaatacgcaagaaaactt
ggctacagtgatagccaagtaaaatcagcaatgaaaaagttaggaccagataccgtagat
caaaatgaattactacatgaactaataaaagctgcaaattcacaaagagacggaatatct
tttgaaaattcatcagatttgtcaactttttatgaatctgtaacaaccccatcaaataca
ggaactgcatttttgcgtcacgtggtagttgatggatcaaatgttgcaatgagtcatggc
aacaatcaagtcttctcatgtcgaggcattgctattgtcgtaaactggtttcaaaaacga
ggccatgcagtaaccgtttttgtacctaactggagaaatgaatcctcaaagcaaaataca
ccaataattgatcaagaaattttaacaaagttgagcgatgatggagttttgagttttact
ccatcaagacgtgttggtggaaagcttattcaatgctacgatgatagatatattgttcga
ttagccgttgagactgatggtataattgtctctaatgatcattttagagatatacaaaga
gatatgcatgaatggaaagattttattaataaacgtcttttaatgtacacctttgctggc
gatatttttatgccacctgatgatcctcttggtcgacatgggccaacgttaaacgaattt
ttaaaaaaaagtgttgaaaaaaaaggaatacaattttgtccttacggaaagaagtgtaca
tttggaccaaaatgcaagttttatcaccctgaacgtcggtttacaggttcatttatgaag
aaacctttaccaccgctgcccaatcagccgcaagaaactaatagtggatcacgacctcgt
tctgatcctggacaaagtttttcagcagcacttgacggcaaacaaagaccaataagttta
cctaaccttgaacagttatacgtttctcctcctcattctttgcataggtttatttacgtc
caaaataacgacttttcacgtcctataagtggacctccttttcaaggaaatattaatatc
tcgcaaaatattaatgctatatacaatataaacaatgaaattagtttttcaatggaacat
tctcataaacaaaaatttagtggcgatcattttacccctcaatatttacttgtaccgcca
cattgcagaggtgaattaggaagtaataaaactaattcaaacatacaaactaactgtgat
tacgtaggtaggcctttatcgtcagattttagcagcagaccatcttctggagaatatagt
tatagcagtgaaagtaggccacattctggtgagtatggaagtaatagtcgtctatcatct
gaagattttagcccaatgcaacaatggagtatgggattataccagagacaatataatcat
gggaacttttatcctatgaaaaactattatcgcaatacaccgacacttccggaaacgcag
gaagagactcgtcatgcaccgggttcattgaaaattgaaattgtagaacagcttcgagaa
ctatttccagatcaatatgataaaattttatgggttttaaggacttacccagaaataaag
aatattgatgatgcaatacccattatgaaagaatgtttaaatacgtag
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