KEGG   Hydra vulgaris (swiftwater hydra): 100198782
Entry
100198782         CDS       T01080                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hmg03041]
    100198782
Spliceosome [BR:hmg03041]
 Complex B
  Other components
   Complex B specific factors
    100198782
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd LisH_TPL WDR90_beta-prop_4th Beta-prop_TEP1_C NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Beta-prop_NWD2_C Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_BBS7 Beta-prop_WDR75_2nd Mala_s_1-like Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_LRRK2 Beta-prop_NOL10_N LisH_WDR26 WD40_like CDtoxinA VPS8_N Beta-prop_WDR11_2nd GerA
Other DBs
NCBI-GeneID: 100198782
NCBI-ProteinID: XP_047126829
LinkDB
Position
2:67793099..67820891
AA seq 513 aa
MALEVESADVIRLIQQYLKESNLRRTLQTLQEESSVTLNTVDSVDGFVSDINNGHWDIVL
QAIQSLKLPDKTLIDLYEQIVVELIELRELGAARSLLRQTDPMLMLKKQQADRYLRLENL
LARSYFDPREAYPDGSSKEKRRHAIAQALSGEVNVVPPSRLMALLGQALKWQQYQGLLPP
GTSIDLFRGKAAVKGTEEEKYPTYLSKTVKFGVKSHPTSCVFSPDGQYLVTGSADGFIEV
WNYQTGKVRKDLKYQSEDNFMLMEDAVLCLSFSRDSEMLLSGSQDGKIKVWKIQTGQCLR
RFETAHSKGVTSVQFSKDSGQILSASYDHTIRIHGLKSGRTLKEFRGHTSFVNDAMFTQD
NYQVISCSSDGTVKVWNVKSGECVHTFQGGIGGSTAGIRINSVHSLPRAMDQFILCNKSS
TIFSMNMQGQIMRTFTSGKREGGDFVCCEVSPNGEWIYCVGEDFVLYCFSVTSGKLERTM
AVHEKDVIGLCHHPHQNLLSTYSEDGTMKIWKA
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggcgctcgaagttgaatcggctgatgttataagattaattcaacagtatttaaaagaa
agcaacttaagaagaacactccagacacttcaggaagagtcaagtgtaactttaaacaca
gttgatagtgttgatggttttgtgtcagatattaataatgggcactgggatatagtattg
caggctattcaatctctcaagttacctgataaaacactcattgatctctatgaacagata
gttgtagagttaattgaactccgtgagcttggtgctgctagatcacttttgcgacagact
gatccaatgttaatgttaaaaaagcaacaagctgatcgatatcttcgtctcgaaaatctt
ttggcaagatcatattttgatcctcgtgaagcttacccagatggaagcagcaaagaaaaa
agaaggcatgcaattgcacaagctttgtctggtgaggttaatgttgttccgccatcacgt
ctaatggctttgcttggtcaagctcttaaatggcagcaatatcaaggcttacttccacct
ggaacatcaatagatctgtttcgtggaaaagcagcagtaaaaggtacagaggaagagaaa
tatccaacttatttgagcaaaacagtcaagtttggagttaagtctcatcctacatcatgt
gttttttcacctgacggacaatatcttgtgacaggaagtgcagatggttttattgaagtt
tggaactatcaaactggaaaagttagaaaagatttgaaatatcaatctgaggataacttt
atgttaatggaagatgctgtgctgtgtttatcattcagtagagatagtgaaatgttatta
tctggaagccaagatggcaaaattaaagtatggaagatacaaactggccaatgtttgcga
cgatttgaaacagctcattcaaagggtgttacttctgttcagttttctaaagattctggt
caaattttaagtgcttcatatgatcatacaataagaatacatggacttaagtctggtcga
acactgaaagagtttcgtggacatacatcttttgtaaatgatgccatgtttacacaagat
aactaccaagtaatcagttgcagcagtgatggtactgtaaaggtttggaatgttaagtct
ggtgaatgtgtacacacttttcaaggaggtattggaggatcaactgctggaattagaatt
aactcagtgcattctcttccaagagccatggatcagtttatcttatgtaacaagtcaagt
acaattttttcaatgaatatgcaagggcagataatgcgaactttcacatctggtaagaga
gaaggcggagactttgtttgctgtgaagtatcacccaacggagaatggatttattgcgtt
ggcgaagattttgttttatattgttttagtgtaacttctgggaaacttgaaagaacaatg
gctgttcatgaaaaagacgttattggcttatgtcatcacccgcatcaaaatcttttatcg
acatattctgaagatggaacaatgaaaatatggaaagcatag

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