Hydra vulgaris (swiftwater hydra): 100199065
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Entry
100199065 CDS
T01080
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03013
Nucleocytoplasmic transport
hmg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100199065
03015 mRNA surveillance pathway
100199065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100199065
Enzymes [BR:
hmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100199065
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100199065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
100199065
NCBI-ProteinID:
XP_047138883
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All DBs
Position
8:complement(39901157..39940654)
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AA seq
473 aa
AA seq
DB search
MADEDWAALVEDYEKSTEKVKELSVSDEKPVATTTNQNNEEETPINLAEASLMTKVVREH
IINVKANVEVQQKDPNSPLYSVKKFEDLHLNSKLLSGVYSMGFNKPSKIQETALPMLLAD
PPNNMIAQSQSGTGKTAAFVLAMLSRVDASKPYPQALCLSPTFELAQQTGKVLEKMGKFL
IEDGLKVSYAIRGNKLSIGRKCNDHIIIGTPGSVLDWVMRYKAFDPQKITIFVLDEADVM
ISQQGHQDQSIRIKKLLKPDCQLLLFSATYDSEVMNFANSVVSDAVVIRLRKEEESLDNI
KQFYVMCDSVEAKYEALANLYGALTIGQTMVFCHTKKSVNWLAEKLSKDGHAVGLLTGDL
EIEQRIDILNRFRDGKEKVLIATNVAARGIDVEQVTIVINYDLPVDAMNRPDFETYLHRI
GRTGRFGKRGLAINFVDGRKTMAMVEAISKHFGKPIDLLQVDDLDELEKLNAK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaagattgggctgcattagtcgaagattatgaaaaaagcacagaaaaagtt
aaggagttatctgtttctgatgaaaaacctgtggctacaacaacaaatcaaaacaatgaa
gaagagacacctatcaacttagctgaagcttctcttatgacaaaggttgttcgtgaacat
attatcaatgtcaaagcaaatgttgaagtgcagcagaaagatccaaactctcctttatac
tcagtcaaaaaatttgaagacctgcatttaaatagcaaacttttatcaggagtttactct
atgggttttaataaaccttccaagattcaagaaactgctttacctatgcttttggcagac
cccccaaacaacatgattgcacaaagtcaaagtggaactggaaaaacagctgcttttgtg
ttagcaatgttaagccgagttgatgcttctaaaccatacccacaggcattatgtttatct
cctacattcgaattagctcaacagactggaaaggtacttgagaaaatgggaaaattttta
attgaagatggtttgaaggtttcctatgcaatacgtggcaataaattatcaattggtaga
aaatgtaatgatcacattatcattggtacacctggatcagtacttgattgggtaatgcgt
tataaagcatttgatcctcaaaaaataacaatttttgttttggatgaagctgatgtcatg
atttctcaacaaggccatcaggaccaatcaataagaatcaaaaaactcctgaaaccagat
tgtcagctgcttttattctcagcaacatatgacagtgaagttatgaattttgcgaatagt
gtagtttctgatgcagtagttatacgactacgtaaagaagaagaaagcttagacaatata
aaacagttttatgttatgtgtgattctgttgaggcaaaatacgaagctcttgcgaatctg
tatggtgctttaacaattggtcagacaatggttttttgccatacaaaaaaatcagtaaac
tggcttgctgagaaattatcaaaagatggccatgctgttggattactcactggagatcta
gaaattgagcaaagaattgacatacttaatcgatttcgtgatggtaaagaaaaggttctc
atagctacaaacgttgcagctcgtggtattgatgttgaacaagtaactattgtcataaat
tatgatttacctgttgatgctatgaacagaccagactttgaaacatatcttcacagaata
gggcgcacaggtagatttggaaaaagaggtctcgctataaattttgtggacggtcgtaaa
accatggcaatggtagaagcaattagtaaacattttggtaaacctatagatcttttacaa
gtagacgatttagatgagcttgaaaaacttaacgcaaaataa
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