Hydra vulgaris (swiftwater hydra): 100199403
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Entry
100199403 CDS
T01080
Name
(RefSeq) F-box/WD repeat-containing protein 11
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04120
Ubiquitin mediated proteolysis
hmg04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100199403
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100199403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hmg04121
]
100199403
03036 Chromosome and associated proteins [BR:
hmg03036
]
100199403
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100199403
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100199403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-TrCP_D
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_DCAF4
F-box-like
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_IP5PC_F
WD40_like
F-box
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_2nd
Beta-prop_Vps41
F-box_5
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100199403
NCBI-ProteinID:
XP_002161479
UniProt:
T2M3W3
LinkDB
All DBs
Position
3:46662023..46693496
Genome browser
AA seq
508 aa
AA seq
DB search
MDFETVPLKPLRDSLEENELIDNIKTTSLTCTNAQYEIEKEKCFKCFDNWSSEDQIDFIE
DLLLRMSHYQHGHINIFLKPMLQRDFISALPAKGLEHVAEKILSYLDAKSLRAAEFVCKE
WHRVIAEGMLWRKLIHRKIVNDSLWKGLGERRGWINFLNKYSQQANHSYFRNLYPKIVQD
IEKLESNWRCGRHGLLKIPCHSENIKGVYCLQYDDEKIVSGLRDNTIKLWDRKTLDCTQV
LHGHTGSVLCLQYDENIIVTGSSDATVRIWDVHSGEMLNTLIHHSEAVLHLRFQDGLMIT
CSKDRSIAVWGLQSATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTGTCEF
VRTLSGHRRGIACLQYRGTLVVSGSSDFTIRLWDIDCGSCLRVLEGHEELVRCIRFDGKH
IVSGAYDGKIKVWDLQAALDPRKPNSSLCIRTLMEHQGRVFRLQFDDFQIVSSSHDDSIL
IWDFLDTQPQDNTKGMHAYARKLTHTCE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaaacggttccattaaaacctctcagagactcgcttgaagaaaatgaactt
atagataacattaaaactacttctttaacttgtacaaatgctcaatacgaaattgaaaaa
gagaaatgttttaaatgttttgataattggtcttcagaagaccaaatagactttattgaa
gacttgttgttacgtatgtcacattaccaacatggtcatataaatatttttttaaaacct
atgctgcaaagagactttatatctgcattgccagcaaagggacttgaacatgtggcagaa
aaaatactatcatatctagatgctaaatctttgcgggctgctgaatttgtttgcaaagaa
tggcatcgtgttatagctgagggcatgctttggagaaaacttatacatagaaaaattgtt
aatgattctttatggaaaggcttaggagaaagaagaggatggattaacttcttgaataaa
tattcacaacaagccaatcattcttattttcgtaatttatatccgaagattgttcaagac
atagaaaaattagaatcaaattggagatgcggtagacatggccttctaaagataccatgt
catagtgaaaatattaaaggagtttattgtttacaatacgatgatgaaaagattgttagt
ggacttagagacaatacaattaagctttgggacagaaaaacactagattgtacacaagtt
ttacacggacatactgggtctgtcttgtgtttgcaatatgatgaaaatataattgttact
ggatcaagtgatgcaactgtaagaatatgggatgttcattctggagaaatgcttaataca
cttattcatcacagtgaagctgttttacacttgcgctttcaagatggtttgatgattaca
tgttctaaagatcgctctattgctgtatggggtttgcaatcagctactgacataactctt
cgtagagttttagtgggtcatcgtgcagctgtaaatgttgttgactttgatgataaatat
attgtttctgcatcaggcgaccgaacaataaaggtatggaatactggtacatgtgagttt
gttagaacattaagtggacacagacgagggattgcttgtcttcaatacaggggcacttta
gttgtaagcggctcttctgatttcacaataaggttatgggacattgattgtggttcttgc
ttaagagttttagaaggtcatgaagaacttgtaaggtgtattcgttttgatggtaaacat
atagtgagtggggcgtatgatggaaagattaaagtttgggacttacaagctgctcttgat
ccacgcaaaccaaattcttctttatgcataagaacattaatggaacaccaaggtcgagtt
tttcggttgcagtttgacgactttcagattgttagcagttcacatgatgattctatttta
atatgggactttttagatacacaacctcaagacaatacaaaaggaatgcatgcgtatgcg
cgcaagttaacccatacgtgtgaatag
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