Hydra vulgaris (swiftwater hydra): 100199405
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Entry
100199405 CDS
T01080
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100199405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hmg03041
]
100199405
Spliceosome [BR:
hmg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100199405
Complex C
U4/U6.U5 tri-SnRNP related factors
100199405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-U1
C2H2-zf_KIN17
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
100199405
NCBI-ProteinID:
XP_002161925
UniProt:
T2M7N6
LinkDB
All DBs
Position
15:4753280..4771540
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AA seq
206 aa
AA seq
DB search
MASSSKKTSETSGDHFRRTWDKDEFEEKAKSRLKEDLALLEDDNDRKSRSDPPVQREKLK
ARHYTVDLDSKLGKSIIITKTTPLQEQGGYYCNVCDCVVKDSINFLDHINGRKHQRNMGM
SMKVERSSLDQVRDRFALLKKQKEQEEKKKEYDFDAKIKELEEEEERARLRKKGLKAERK
RKHEESLKEYQDDDVAALMGFGGFGK
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtagcagtaaaaagacatcagaaacctcaggagatcatttcagacgaacttgg
gataaagatgaatttgaggaaaaagcaaaatctaggttaaaagaagatcttgctcttctt
gaagatgataatgacagaaaaagtaggtctgatcctccagttcaaagggaaaaactaaaa
gcacgtcattatacagttgatttagattcaaaattagggaaatctattattattactaaa
actacacctttgcaagagcaaggtggctattattgcaatgtttgtgactgtgttgtaaaa
gactctataaattttcttgatcatattaatggaagaaaacatcagcgtaatatgggaatg
tccatgaaggtagagcgctcatcgttagatcaagtaagagatagatttgctttgcttaaa
aaacagaaagagcaggaagagaaaaaaaaagaatacgattttgatgctaaaataaaagaa
ttagaggaagaggaagaaagagctcgtctacgtaaaaaagggttaaaagccgaaagaaaa
agaaaacacgaagaatccttaaaagaataccaagatgatgatgtcgctgcgttgatgggt
tttggcggctttggaaaatga
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