Hydra vulgaris (swiftwater hydra): 100199409
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Entry
100199409 CDS
T01080
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
hmg01100
Metabolic pathways
Module
hmg_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
100199409
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hmg01003
]
100199409
Enzymes [BR:
hmg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
100199409
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
100199409
Glycosyltransferases [BR:
hmg01003
]
Glycan extension
O-Glycan
100199409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Galactosyl_T
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
100199409
NCBI-ProteinID:
XP_047139667
LinkDB
All DBs
Position
9:14937780..14964932
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AA seq
728 aa
AA seq
DB search
MTRNFRSLLMLLMGLLIGVIFTQLILYHSNKQCTEKQNIQNLQGSELNSYAEKGLRKKKF
IFIGVMTAEKYLDSRAKAVYETWGSDLKGYGKLMFFASSQTKRTDLPVVSLDGVDDSYPP
QRKSMMMLKYMHDNYIDEYEWFVRGDDDVYIRIDKLQSFLRTLNSSDDLYIGQAGTGTKI
EKETLGLGAGNNYCMGGPSVVVSASALSKVTPHFEFCLSHLVTTHEDVEVGRCIKNFVGV
SCTWAFEMQSLFYHNRSGELAFTQNLDTKAVRDAVTLHPIKQSPYMHRLHLHFMELKIRE
RTYDTIQLQRRLVSLDTILEKGLEKLEEEEVISLSDVKNFHNQMMNNETPVWEMFTPRKV
YSYETNSPEIGMISPLKDGMNIVLGQTMAIINKEARKVLHRTLEFKRLNHGYRRYHPKYG
VQYMLDLLMKYHRHIGRNRRRMTVHVRHHAYLQQPFGNTIYSIEPSEKNKNDAVNFILPL
SGRFSTFVYFMKIFENVCLKKNIESTLTIVYFNSGTPSTKHVTLISDLKKKYPLYSFRWL
EMEGVFSRGLALTMGAAQLEKNSLLFFCDVDLEFNEDFIRRCRMNSIIGKQVYYPIVFSQ
FSPNITYGNEQKPNSSFSYSVDEGFWRKFGFGITCQYRSDFDLIGGLDTTIQGWGMEDVD
LYDRYVLSEQHTVFRAVDPGLVHIYHDIICDNNLSEKQLTMCYKSKATAYGSEAKLFKII
SEKGYLKS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcaactttcggagtctgctaatgctgttaatgggacttttaattggagttatt
ttcacacaacttattttgtatcattcaaataaacaatgtacagaaaagcaaaacatacaa
aatttgcaaggcagtgaattgaacagttatgcagaaaaaggtttaagaaaaaaaaagttt
atttttataggagttatgactgctgaaaaataccttgatagtcgagcaaaagctgtctat
gaaacttggggatcagatttaaaaggttatggaaagctcatgttttttgcaagcagccag
acaaagcgtactgatttacctgtagtttctttagatggtgttgatgattcttatccacca
caaaggaaatcaatgatgatgttaaaatatatgcatgacaattacattgatgagtatgaa
tggtttgttcgtggagatgacgatgtttacatacgtatcgacaagctgcaaagttttttg
cgtactcttaatagcagcgatgacctttatattggccaagcaggaaccggaactaaaata
gaaaaagaaactttaggtttaggagctggaaataactattgtatggggggtcctagtgtt
gttgtgagtgctagtgctctgtcaaaagttactccacattttgaattctgcttaagtcat
ttagtaacaacacatgaagatgtggaagtaggaagatgcattaaaaattttgttggagtt
tcatgtacctgggcatttgagatgcaatctttgttctaccataatcgatctggtgaactt
gcatttactcagaacttagatacaaaagctgttcgggatgctgtaactcttcatcctatc
aagcaatccccatatatgcatagactgcatttgcattttatggagttaaaaatacgtgaa
cgtacatatgataccattcaacttcaaagacggcttgtttctcttgacacgattcttgaa
aaagggctagaaaagctagaagaagaagaagttatttccttaagtgatgtgaaaaatttc
cacaatcaaatgatgaacaatgagactcctgtgtgggaaatgtttacacctagaaaggtt
tattcttacgaaacaaactctcctgaaattggtatgatcagtcctttgaaagatggaatg
aatattgttctgggtcaaaccatggcaattattaataaagaggctcgcaaagtattgcat
agaacattagagtttaaaagactaaaccatggctatcgtcgttaccatccaaagtatggt
gtccagtacatgttagatcttcttatgaaatatcatcgtcatattgggcgaaatcgaaga
agaatgacagttcatgttcgccatcatgcatatttacaacagccctttggaaatacaatc
tattctatagaacccagtgaaaaaaataaaaatgatgctgtcaattttattttaccccta
tctggtcgtttttctacatttgtttattttatgaaaatatttgaaaatgtttgtttaaaa
aaaaatattgaaagtacgctaaccattgtttattttaacagtggaacgccttccacaaaa
cacgtaactttgatttctgatttgaaaaaaaaatatccgctttatagctttcgctggctc
gaaatggaaggcgtattttcaagaggcttagcattaaccatgggtgctgctcaacttgaa
aaaaactcattgctatttttttgtgatgtggatcttgagtttaatgaagactttataagg
cgctgtagaatgaattctataataggaaaacaagtctattatccaatagttttcagccag
ttttctccaaatattacatatggaaatgaacaaaaaccaaatagctcattttcgtattca
gtagatgaaggtttttggagaaagtttggatttggtattacttgccagtataggtcagac
tttgatctgattggaggcctggatactactattcaaggatggggaatggaagatgtggat
ttatatgacagatatgtgctcagcgaacaacatactgtttttcgagctgttgatcctggt
ttagttcacatataccatgatatcatttgtgataataatctttcagaaaagcagttaact
atgtgctacaaatcaaaggcgacagcatatggttctgaagcaaaactttttaaaattata
tctgaaaaaggatacttgaagagttaa
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