Hydra vulgaris (swiftwater hydra): 100199511
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Entry
100199511 CDS
T01080
Name
(RefSeq) integrator complex subunit 6
KO
K13143
integrator complex subunit 6
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hmg03041
]
100199511
Spliceosome [BR:
hmg03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
100199511
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_INTS6
VWA_2
INT_SG_DDX_CT_C
VWA
Motif
Other DBs
NCBI-GeneID:
100199511
NCBI-ProteinID:
XP_012555837
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All DBs
Position
4:4045972..4077913
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AA seq
1056 aa
AA seq
DB search
MVILVFLVDTSASMNQKTCLGTTYLDLAKGAVESFLKIRARDINASRGDRYMLVTFDEHN
KSVKVGWRENLAQFLKELKNLEAYGLTDLGGALKQAFDLLNMTRLQSGIDNYGLGRNPYY
LEPALVMLFSDGCDLINVNGITGEIIVPSNNQLPGAELTKEIYRWDQRLFALNLKIPGFA
ASVNEKLSTLQAEDMALSNLCEDTGGKLYSIGSYKTLLQSLESIAQKIAVPGVIINFEKH
GPDPEPILKDGSKTPKTEEESVSPALDNNGVLPISFNSTVPLMNGFLSHSNRLLNENIMN
GNLNNSFLPTDSNGNIALGGLLLPPPILHPGMIPPPPLPVGMLSKGLHPPPMSSILQSMS
FPSHINIPVKNVIPTRMMNGKIEAESAKVIPKTDAQNTSVSVIPENPIRGDEHPDLHSDM
VSPVSVLSPSMAWTKQRRMIFVRTNIKGTVGHWPIPESYWPDSSMIALPPRDSHPVIKFQ
CKPCEAMIIDNLPFDKYELEPSPLTQYILERKQPNIAWQVFVSGSSCDSEIGYPFGYLKA
ATNLLCVNLFVLPYNYPVVMPLIDELIKVHKCKPSPKWQQSFEQYLRKMPSYYIVSLQNA
FKRMGVTNNLIPDHFDGSLNYNILSYMKRIKHLGKNEAERLINIHSQQSTADPIKITLPY
APQLTDGKQKDFKAFLLKENVAINRIKPEPIDDKTKMTTEEAQVFMSRNLPALVERFQVQ
SYKNPFDIHRGDIIDHVNRMRANFFQMPNILSSRMHDEELKHCISISMMGNYKEPELQQV
KPLREVDSSQIRLHTFGNPFKLKEQDQQFIVDEADESAFNQNPRKRFNEPLALKVKRKRN
DSAPSRRPVGRPNTPPPKLISFSKLEPVKNIINQVIDQKCLKPEDTYVKNNSKDSKVVNK
KDDKKLTSISVNDQLRKLQKMHRKRKVNNLNNDEKLDTESTLVSSSTNVPIFSLEVPKES
LISNDVNNLSNHSLKQARLELQKKYPVKIRLEVWKALRERKDFQFILNLLESLNVSTNAK
FLFINELIDESNRFQLHSLVKKLETLLQNLVISEKS
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggtcattttagtttttttggtagatactagtgcgtctatgaaccaaaagacgtgcctt
ggtactacctatttagacctagcaaaaggagctgtggaatcttttttaaaaatacgagct
cgtgacattaatgccagtcgtggagatcgttatatgttggtgacttttgacgaacataat
aaatctgttaaggttggttggagagaaaatcttgcacaatttttaaaagaattaaagaat
ttagaagcatatggtcttactgatcttggtggagctttaaaacaagcttttgacttactg
aatatgacacggttacagtcaggaatagataattatggtttgggtaggaatccttattac
ttagaacctgctttagtaatgttgttttcggatggatgtgatcttattaatgtcaatgga
attacaggagagataattgtaccatctaataaccagttacctggtgctgagttaacaaaa
gaaatatataggtgggaccagcgattgtttgcattaaaccttaaaataccaggttttgca
gcctctgtaaatgaaaagttatctactttacaagcagaagatatggctctttcaaatctt
tgtgaagatactggaggaaagttatatagtattggaagttacaaaacgttattgcaatct
cttgaatcaattgctcaaaaaattgcagttccaggtgttataattaattttgaaaagcat
ggtcctgaccctgaaccaattttaaaggatggatcaaaaacaccaaaaactgaagaagaa
tctgtttcccctgctcttgataataatggtgtacttccgatttcatttaattctacagtt
ccactaatgaatggctttctttcacactctaatcgtctattaaatgaaaatataatgaat
gggaatctcaataatagctttctacctacagattcaaatggaaatattgctttaggaggt
ttgttactacctcctcctattctccatcctggaatgatccctccccctcctcttcctgtt
ggaatgctttcgaaaggtctgcatccaccacctatgtctagtatccttcaatcaatgtca
tttccatctcacattaacatacctgttaaaaatgtaattccgacaagaatgatgaatgga
aaaattgaagctgagtcagctaaagtgataccaaaaactgatgcacaaaatacaagtgtt
tctgttattcctgaaaatccaattcgtggtgatgaacatcctgatcttcattctgatatg
gtttcgcccgtttcagttttgtcaccttctatggcttggactaaacagcggcggatgatt
tttgttcgcacaaatataaaaggaactgttggacattggcctatcccagaatcttattgg
ccagattcatctatgattgctttgccaccacgtgatagtcatcctgtcataaagtttcag
tgtaaaccttgtgaagcaatgatcattgataaccttccatttgacaagtacgagcttgaa
ccttcacctttaactcaatatatacttgaacgaaaacaaccaaatattgcatggcaggtg
tttgttagtggtagctcatgtgattctgagattggttatccatttggttacttaaaagct
gctacgaatcttttgtgtgtaaatttgtttgtccttccatataactacccagtggttatg
ccgttgattgatgaattgataaaagtacacaagtgtaaaccttctccaaaatggcagcag
tcttttgagcaatatttaagaaagatgccaagttattatattgtgtcacttcaaaatgca
tttaaaagaatgggagttactaacaacttaatacctgatcattttgatggttccttaaat
tacaatattctttcatatatgaaaagaatcaagcatcttgggaaaaatgaagcagagagg
ctgataaatattcacagtcaacagagcacagctgaccccatcaaaataacgttaccatat
gcaccacaattgacagatggtaaacaaaaagattttaaagcatttttgttaaaagaaaat
gttgcaataaatcgtataaaacctgaaccaattgatgacaaaacaaaaatgaccactgag
gaagctcaagttttcatgtctagaaatttacctgcattggttgagagatttcaagtccaa
agttataagaatccatttgacattcatcgtggtgatattattgaccatgttaacagaatg
agagctaacttttttcaaatgccaaatattctaagcagcagaatgcatgatgaggaatta
aaacattgcatttctataagcatgatgggtaactacaaagagccggaacttcaacaagta
aaacctctacgcgaagtagattctagtcaaattcgtttgcatacctttggaaatccattc
aagttaaaagaacaggaccaacaatttatcgttgatgaagcagatgaaagtgcttttaac
caaaaccctcgaaagcgttttaacgaaccgttagctttaaaagtaaaacgaaaaagaaat
gattctgctcctagtaggcgtccagttgggcgtcctaatactccgccgccaaaactcata
tctttttctaaattagaacccgttaaaaatattataaatcaagttatcgatcaaaagtgt
cttaaacctgaagacacctatgttaaaaacaatagcaaagactcgaaagttgtgaataag
aaagacgataaaaaactaacatctataagtgtaaacgaccaacttcgaaaattacaaaaa
atgcatagaaagagaaaagttaataatttaaataacgatgaaaaattagacactgaaagt
actttagtttcttcctcgacaaacgttccaattttttctttagaggttcccaaagaatct
cttatatcaaatgatgtaaataatctttctaatcattctctaaaacaagcgaggttagaa
cttcaaaaaaaatatcctgttaaaattcgtcttgaagtctggaaagctcttcgagaacgg
aaagattttcaatttatactcaacctcttggaatcattaaacgtttctactaacgctaaa
tttctgtttattaacgaacttatagacgaaagtaatagatttcaattgcatagtcttgta
aagaagcttgagactttacttcaaaatttagtaatatctgaaaaaagttaa
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