Hydra vulgaris (swiftwater hydra): 100199563
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Entry
100199563 CDS
T01080
Name
(RefSeq) tuftelin-interacting protein 11 isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hmg03041
]
100199563
Spliceosome [BR:
hmg03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
100199563
Other components
Complex C specific factors
100199563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
100199563
NCBI-ProteinID:
XP_012559008
UniProt:
T2M4G5
LinkDB
All DBs
Position
7:44179848..44249160
Genome browser
AA seq
788 aa
AA seq
DB search
MASDEEFESFEITDFDLESELYPGQHKKQTKEQAIYGVWANSDDENDGHMQRKSRKKFEV
SDYVDPMGFVSGGLFNEKGEADEKKDDEMNIPVISEERKKGFKSKTVINSKNFGAWEKYT
TGFGSKMLEKMGYKGKGLGKHGEGITEPIEAFKRGGRAAIGAYGSETKKSREPVYDSEEN
EEIEIKAEIEKLHQWKKTGEESGKPKYVYKTAEEVKKSGATQKLAPLLSYGNNIKVVDMT
GPETKVLQGYNAIGHQHAKPGEGEKKGIIGDDHKDFDIPELLYNLNLLVDLAESEIIQID
RQLRFEKDNVVNLTYEKERLDKVVQNEDIEINNLEHVLRIIDRCKAGFQPDNDEPLTVEG
LVHCFQTLKDDFYEEYKLYNLDKLVVPLGFPLLARHFSSWQPFSEPTHGIEYVKLWKNVL
ESEQKNIEFEKTKENRSMSPFERIIWEIWMPHIRTAIGIWQAKNPDPLISVLEAWVQLIP
DWVVANILDQLILPKLQAAVEFWNPLTDPVPIHSWIHPWLPLMGDRLEPLYPPIRHKLSA
ALTNWYPSDPSAKVILEPWVKVFSRGTMEAFLIRSIYPKLEQCMSEFKINPHQQILEPFH
WVMAWKDIISVHHMVSILEKHLFPKLLQVLRKWLLNSPNYDEVTKWYLGWKSMFGAEYTS
NPTIKEQFNRALALMNQAVSGTMQPGAKENVAYLTSTERRREAEQAFLSEKVQALTSSSI
PTRFKDLVEQAAVENGLIFIPLPNRWHEGKTVYSFGKCVIYIDRDVVFYSTEGKWKPLSL
QELIDYAK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgatgaagagtttgaaagttttgaaattacagattttgatttggaaagtgag
ctttatcctggtcaacataagaaacaaacaaaagaacaggcaatatatggtgtatgggca
aattctgatgatgaaaatgatggtcatatgcaaagaaaatcaaggaagaaatttgaagtt
tctgattatgttgatccaatgggatttgtcagtggaggattgtttaatgaaaaaggtgaa
gctgatgagaaaaaagatgatgaaatgaatataccagtaatatcagaggagagaaaaaaa
ggtttcaaaagcaaaacagttataaacagcaagaactttggtgcttgggaaaagtatact
actggctttggaagtaaaatgcttgaaaaaatgggttataaaggcaaaggtcttggaaaa
catggagagggtataactgaacctattgaagcatttaaaagaggcggaagagctgcaatt
ggtgcttatggttctgaaaccaaaaaatcaagagagcctgtatatgacagtgaagaaaat
gaagaaatagaaattaaagctgaaatagaaaaattacatcagtggaaaaaaactggagaa
gaatcaggcaagccaaagtatgtttacaaaacagctgaggaagtaaaaaaaagtggcgcc
actcaaaagctggcaccattactttcctatggaaataacattaaagttgttgatatgact
ggacctgaaacaaaagttttgcaaggttataatgcaatagggcatcagcatgcaaaaccc
ggggaaggagaaaaaaaaggtatcattggagatgatcacaaagattttgacattcctgag
ctcctttacaatttaaatttattagtggatcttgctgaatctgaaattattcagattgat
agacaacttcgatttgaaaaagacaatgttgtgaatttaacatatgaaaaggaacgctta
gataaagttgtacaaaatgaagatatagaaataaataatctggaacatgttcttagaatc
attgatagatgcaaagcaggttttcaacctgataatgatgaacctttaactgtagaagga
ttggttcattgttttcaaacactgaaagatgatttttatgaagaatacaaattatataat
ttggataaactagtagttcctttgggttttccactcctagcccgtcatttcagctcctgg
caaccttttagtgaaccaacacatggtatcgagtatgtcaaactgtggaagaatgttctt
gaatctgaacaaaaaaatatagagtttgaaaaaacaaaagaaaatagaagcatgagtcca
tttgaaagaataatttgggagatatggatgccacatattcgcactgctattggaatttgg
caagctaaaaatcccgatcctttaatttctgtattagaagcttgggtacaacttattcca
gattgggtagttgcaaacatattagatcaattaatattgccaaagttacaagcagctgtt
gaattctggaatcctttgacagaccctgttcctatacattcctggatacatccttggctt
cctctaatgggtgatcgacttgaacccttgtacccacctatacgacataaactgtctgct
gcacttactaattggtatccatcagacccatctgctaaagttattttagaaccttgggtt
aaggtattttctcgaggcactatggaagcttttttgataagaagcatttacccgaaactt
gaacaatgtatgagcgaattcaaaataaatcctcaccaacagattttagagccttttcac
tgggtcatggcatggaaagatattatcagtgtccatcatatggttagcatactagaaaaa
catttatttccaaaactgctacaggttttacgaaagtggttgctaaattcaccaaattat
gatgaagttacaaaatggtatcttgggtggaagtcaatgtttggtgcagagtatacttct
aatccaaccattaaagagcagttcaatcgagcattggccttgatgaatcaagctgttagt
ggaaccatgcaacctggtgcaaaggaaaatgtagcttatctaacaagcacagaaagaagg
cgcgaagcagaacaagcttttctttctgaaaaggttcaagcgttaacgtctagctccatt
ccgactcgttttaaggaccttgtggaacaagctgctgttgagaatggcttgatttttatt
cctttgcctaatcgttggcatgaagggaagacggtttattcgtttggaaaatgtgttatt
tacattgatcgcgacgttgtgttttattcaaccgaaggaaaatggaaacctttgtcattg
caagaactcattgactatgctaaataa
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