Hydra vulgaris (swiftwater hydra): 100199591
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Entry
100199591 CDS
T01080
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hmg03037
]
100199591
Cilium and associated proteins [BR:
hmg03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
100199591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_6
TPR_8
TPR_14
TPR_16
TPR_7
TPR_19
ANAPC3
TPR_17
TPR_9
TPR_11
TPR_10
TPR_Slam
ARM_TT21_4th
TPR_CcmH_CycH
Wzy_C_2
HAT_PRP39_C
DUF6584
BTAD
ARM_TT21_5th
T7SS_EccA1_N
RPN7
HEAT_Nup120
ARM_TT21_C
TPR_15
NatA_aux_su
Sel1
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
100199591
NCBI-ProteinID:
XP_047128340
LinkDB
All DBs
Position
3:17945626..17991258
Genome browser
AA seq
821 aa
AA seq
DB search
MSWENSMLNSVHLVGEDDTGDLYSDFENVYDAAFDTEGLYEDEGFQKALKTSYGKRLGSS
AGRPPLRTAADNRMNTSLNRGHVAVPSMGGRLATGVATNPAQARPMTAVRAAGYSSAGKS
SNTLLDPLLQTKGPAPLLDVKSEDSPEEKLKILEKQTMALVEESCYAAERNDFKLALEKA
KEAGRMERNLCRHQEQSQLTEHINLDITYSVLFNLASSYHNLQMYNEAINTYNVIIKNKM
FSNAGRLRINIGNIYYVQRNYAQAIKYYRMALDQIPQTHKQVRIPMMKNIAMVFVKMAQY
SDALTTYEHIMTDLPDMQTGFNLLLCAYALNDKEKMKKSFQKLTQIASIDVDNEKYNPSA
NDHHGQMVLDAIRDDSLRRYNKQKQLNAERYITMAAKLIAPVIEDGFDEGFDWCTDIVKA
SPYIELANELEITRSLVYLKQKDFTKAAQILKKFEKKSSKMQSQAAVNLSFLYFLEGDVA
QSDKHAEIAISSDRYNPAALLNKGNAEYYNGNYLKAKDYYAEALNIEASCTEALHNLGLC
YKKMSKFDEALECFHKLNLVLPNNAEVICQIGQIYENDKNTAEALEWYQQLLNIVPTDCE
VLRKVAMLYEEDGDKSQAFQYMYEAFRYYPSCIKTLVWLGGYYIDAQFIEKAITYFERAV
QVQPLEVRWHLMLATCYRKAGNYTQAMETYKEIHKKFPENLDCIRFLVKLCQDQGLSQEQ
NEYSQKLIKIQKMLEQKEQRVNSGKRKGSGKVQKVSEENILVTPDRVSSGKEKKGPKNVD
SSYADPMGDTPVRPKTAAASSKPKDIDEFADEEICDDLLPD
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggaaaatagtatgttaaactctgtacatttggtgggtgaagatgatactggg
gacttatacagtgattttgaaaatgtctatgatgcagcgtttgatactgagggtttgtat
gaagatgaaggatttcaaaaagctttgaaaactagttatggaaaaagattgggttcaagt
gctggcagaccacctctcagaacagctgcagacaatagaatgaacacatctttgaatcgt
ggtcatgttgctgtgccatccatgggaggtagattagcaacaggtgttgctactaaccct
gcgcaagccagaccaatgacagctgttcgagcggcaggttattcatctgcaggaaaatca
tctaacactttacttgatcccttgctacaaacaaaaggtccagctcctctgttagatgtc
aaatcagaagatagtcctgaggagaagttaaagatattagaaaaacaaacaatggcgctt
gttgaagaaagctgttatgcagctgagaggaacgattttaaattagcattagaaaaagca
aaagaagctggacgaatggaaagaaatttatgtaggcaccaggagcaatcacagttaact
gaacatataaatcttgatatcacttattcggttttgttcaatctagcatcttcttatcat
aatttacagatgtataatgaagcaatcaatacctataatgtgataattaagaacaaaatg
ttcagcaatgctggtagattgcgtataaatattggaaacatttattatgttcaaagaaac
tatgcgcaagctattaaatattacagaatggctcttgatcaaatccctcaaactcacaaa
caagttagaatacctatgatgaaaaacattgccatggtgtttgtaaaaatggctcagtac
agtgatgctttaaccacatacgagcacattatgactgatcttcctgatatgcaaactggt
tttaatctcttgttgtgtgcttatgctttaaatgataaagaaaagatgaaaaagtcattt
caaaagctcacacagattgcatccattgatgttgataatgaaaaatacaacccttctgct
aatgatcatcatggacagatggttttagatgctattcgtgatgactcgttaagaagatat
aataagcaaaaacagctaaatgctgaaagatacatcactatggcggctaaacttattgct
cctgttattgaagatggattcgatgaagggtttgattggtgtactgatattgtaaaagca
tctccatatattgaacttgcaaatgaacttgaaatcaccagatcattagtttatttaaaa
caaaaagattttactaaagctgctcaaatacttaaaaaatttgaaaagaaatcttcaaaa
atgcaatctcaggctgctgttaacttatcattcttgtattttttggaaggagatgtagcg
caatcagataagcatgctgaaattgctataagtagtgatcgatacaatccagcagctttg
ctcaacaaaggcaatgcagaatattacaacggaaattatttaaaagcgaaagattattac
gctgaagctttaaatatagaggcatcgtgcacagaggctcttcataatttaggtttgtgt
tacaaaaagatgagcaagtttgatgaagctttagaatgttttcataaattgaatttagtt
ctgcctaataatgctgaagtcatttgtcagattggccaaatctacgaaaatgacaaaaat
actgcggaggcattggaatggtatcaacaattgttgaatattgttccaacagattgtgaa
gtcttaaggaaggtggccatgctttatgaagaagatggtgataaatctcaagcattccaa
tacatgtatgaggctttcaggtattacccttcatgcattaaaactttagtttggctaggt
ggttattatatagatgcacagtttattgaaaaagctatcacttactttgagagagctgtt
caagtgcagcctttagaagtgcgatggcacttaatgttagcaacttgttaccgaaaagca
ggaaattatactcaagctatggaaacatacaaagaaatccataaaaagtttcctgaaaac
cttgattgtatcagattcctagtaaagctttgccaagaccagggattaagccaagagcaa
aatgaatattctcaaaagctaataaaaattcagaagatgttggaacaaaaagagcagaga
gttaatagtggaaagcgtaagggaagtggaaaagttcaaaaagtctcagaagaaaacatt
cttgttactccagaccgtgtttcaagtggaaaagaaaaaaaaggacctaagaatgtggat
tcttcatatgctgatcctatgggtgatactcctgttagaccaaaaacagctgctgctagt
tctaaaccaaaagacatagatgaatttgcagatgaagaaatttgtgatgaccttttacct
gactaa
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