Hydra vulgaris (swiftwater hydra): 100199777
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Entry
100199777 CDS
T01080
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04140
Autophagy - animal
hmg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100199777
04148 Efferocytosis
100199777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
100199777
Membrane trafficking [BR:
hmg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100199777
Hops complex
100199777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_PEP5_VPS11
PEP5_VPS11_N
VPS11_N
VPS11_C
zf-C3HC4_2
zf-RING_2
Beta-prop_RSE1_2nd
Beta-prop_EML_2
CREPT
zf-rbx1
zf-C3HC4
zf-RING_5
Beta-prop_NUP159_NUP214
Beta-prop_EML
FISNA
zf-C3H2C3
Rad9_Rad53_bind
XhlA
DUF5663
zf-RING-like
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
100199777
NCBI-ProteinID:
XP_047124009
LinkDB
All DBs
Position
15:complement(31531658..31656356)
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AA seq
910 aa
AA seq
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MVLKFHWRKFNFFERDLMKDPVTKQDFSSLKGISITSASSGSGKLLVGDSQGNLHLLNRD
LQLTSFQINKIKVSHLFQLKQNEVLVSIGNDEVGINPLIQVWNFHKLDKNGNPTCIWVSR
ALVTGTKLSEVTCLSVHESLTQMAVGFDDGTVVIFKGDIMNSRSSKQRTIHMDKYPITGL
AYKQYGNSVILFVTTTKCVFSYNVTSSDKKEILEEDFGASLDCSAINDASTENQFVVATD
DGLHFYHPEGKRACLAFDGEKKMVSWFRGYLVVVSKEMKQLPKTAGTGLSMNILTVYDID
NSFIAYSAPFPDVVAVLPEWSCLHVLSSDGKIFQLVEKDTKTKLEILFRKNMYDMAIRLA
KSQQYAEGLYDIFKYYGDHLYQKRDHDGAMQQYIRTIGHLEPSYVIKNFLDAQRIHNLTD
YLQALHEKGLANTDHTTLLINCYTKLKAVDKLNGFINTDKELNFDVETAIKVCRQAGYFE
HALQLAEKKKQHEWYIKIQLEDIKDYETALKYMHTLPFQEAESNLRKYGKTLVNNETEKT
TAFLKELCTNYQQIHAEALKQEVQRAHPVDFIHIFVHEKSKLKDFLEYIVKMRNDCSGII
YNTLLELYLHDATMYHAQKNIEKAMEEEKKALDLLIGSESKYDFDHAMVLAQMNNFKRGI
LYLYEKAKSFQQIMHYHMENKEYDNIISDCNKYGDKDISLWSQALSYFAKREDECKTHIA
QVLNHIEEYKLLSPLEVIQELSQNSTASLGIVKDYIIRQLQQENELVAEAESSIKKHKEN
IKKMEKDIEELKTGAKTFQSSKCKICNRLLELPAVHFLCGDSFHQTCFESYSDSENECPI
CAPENRKIKDIIYAQEHNAALHEQFNQQLERSSDGFSVVADYFGRGVFKKVTIYTDMKTK
QPILQNNISE
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttaaatttcattggcgaaagtttaattttttcgaaagagacttaatgaaagat
ccagtaacaaaacaagatttctctagtttaaaggggatttcaataacatcggcatcaagt
ggaagtggaaaacttttagtaggagatagccaaggtaacttgcatcttttaaatcgtgac
cttcagctgacttcatttcaaattaataagattaaagtatcacatctttttcagttaaag
caaaatgaagtgcttgtgtcaattgggaatgacgaagttggtattaatccattaattcaa
gtgtggaactttcataagcttgataaaaatggcaatcccacatgcatatgggtctcaaga
gcacttgttactggcacaaaactttcagaggtaacatgtctttctgtccatgaaagttta
actcaaatggcggttggttttgatgacggaactgttgttatttttaaaggtgacatcatg
aattctaggagtagtaaacaaagaactattcacatggacaagtacccaataacaggtcta
gcatataaacaatatggcaacagtgttatattatttgtaactacaaccaaatgtgttttt
tcatacaatgtaacgtcctcagataaaaaggaaatattagaagaagactttggtgcaagt
ttagattgctcagcaataaacgatgcttcaactgaaaatcagtttgtggttgctactgac
gatggtttacatttttaccacccggaaggaaaaagggcttgcttagcttttgatggtgaa
aaaaagatggtgagttggtttcgtggttatcttgttgttgttagtaaagagatgaagcaa
cttccaaaaactgcaggtactgggttaagcatgaatattttgacagtatatgatattgat
aatagttttattgcttattcagcaccttttccagatgtagttgcagtattacctgaatgg
agttgcttacatgttctttcatcagatggaaagattttccagttggttgaaaaagataca
aaaacaaaactagaaattttgtttcgaaaaaacatgtacgatatggcaataaggcttgca
aaaagtcagcaatatgcagaagggttgtatgacatattcaaatattacggagaccaccta
tatcaaaagcgtgaccatgatggagcaatgcaacagtatattcgcaccattggtcatttg
gaaccttcatatgttattaaaaattttttagatgcacagcgaatacacaacctaactgac
tatttgcaggcattacatgaaaaaggactagcaaacactgaccacacaactctcttgata
aattgttatacaaagctcaaagcggttgataaacttaatggttttataaatacagataaa
gaactcaactttgatgttgaaacagctattaaggtatgcaggcaagctggttattttgaa
catgctttgcaacttgcagaaaagaaaaaacagcatgaatggtatattaaaattcagctt
gaagatataaaagattatgaaacagcattaaagtacatgcacacgcttccatttcaagag
gctgagagtaatttaagaaagtatggaaaaacattagtaaataatgaaactgagaaaacc
actgcatttctaaaagaattgtgtacaaattatcaacagatacatgctgaagcattaaaa
caagaggtacagcgtgcacatccagttgattttattcacatatttgtacatgaaaagtca
aagcttaaagattttcttgagtatattgttaaaatgcgcaatgattgctcaggaataata
tacaacacattattagagctttatttacatgatgcaacaatgtatcatgctcaaaaaaac
attgagaaagcaatggaggaagaaaaaaaagctttagatcttttaattggttcagaatca
aaatatgactttgatcatgcaatggtacttgcacaaatgaataattttaaacgagggatc
ttgtatctttatgagaaagcaaagtcgtttcaacaaattatgcattatcatatggaaaat
aaagaatatgataatattatttcagattgcaataaatatggagataaagatattagttta
tggagtcaagcactgtcttattttgccaaaagagaagatgaatgcaaaacacatattgct
caagttttaaatcatattgaagagtataagcttttgtctccactggaagttatccaagaa
ctgtctcaaaactcaactgcatcgcttggcattgtaaaggattatattattcgtcaatta
caacaagaaaatgaactggttgcagaggcagaatcatcaattaaaaaacacaaagagaat
attaaaaagatggagaaagatattgaagagctaaaaaccggtgcaaaaacttttcaaagt
tcaaaatgtaagatctgcaatcgactgttggaattacctgctgttcatttcttgtgtggt
gattcttttcatcaaacgtgctttgaaagttattccgatagtgaaaatgaatgtcccatt
tgtgctccagagaatcgtaaaattaaagatatcatttatgcacaagaacataatgctgcc
ctacatgaacaatttaatcaacagttggaaagatcaagcgatggtttttctgttgttgct
gattattttggtcgcggagtttttaagaaggttacaatatataccgatatgaaaacgaaa
caaccaattcttcaaaataatatttcagaatag
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