Hydra vulgaris (swiftwater hydra): 100199809
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Entry
100199809 CDS
T01080
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100199809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100199809
03012 Translation factors [BR:
hmg03012
]
100199809
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100199809
Translation factors [BR:
hmg03012
]
Eukaryotic type
Release factors
100199809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
G-alpha
PAM2
Motif
Other DBs
NCBI-GeneID:
100199809
NCBI-ProteinID:
XP_047144370
UniProt:
A0A8B6XFY0
LinkDB
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Position
11:44357041..44398740
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AA seq
585 aa
AA seq
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MSNPWDQVSIGVSELNVAAKPFVPNVNAAAFVPSFIKSAPTTQLPVVQTPVVQSPILPDV
LVPTEDIVDDWDNNPAEETKVPDVEVFQDDSKCHEVCDIPSEVAVEEESIVLTDTVGCNL
EEEQVESLAEKTRKPAKSFSAPIEPDDKKDTINIIFIGHVDAGKSTIGGQLLFLTGQVDK
RTLEKYEREAKEKNRETWYLSWALDTNIEERNKGKTVECGRASFDTESKHFVLLDAPGHK
SFVPNMIGGAAQADVAVLVISARKGEFETGFERGGQTREHAMLAKTCGVRFLIVLINKMD
DLTVKWDKERYNEIVSKLTPFLKKTGFKASETIYMPCSGFTGLNLKDRLTLEQCPWYQGP
SFLEHLDQLPSFKWPYDDPIKVLVSERYKDMGTIVIGKIESGIIRKGDTCTLMPNKNSVK
VIGITGADEIEKNMCKAGENVKLKLSGVEEDEVVPGFVLCHPDHLCNTARVFDAQIVVLE
HKSIICAGYKGVLHIHNAVEEVILVGLIHTIDKKTGEKSAQRPRFIKQDTVAVARFKTAN
LICMETFANFAPMGRFTLRDEGRTVAMGKVLSLHHKKEETESENK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacccatgggatcaagtttcaattggagtttctgagttaaatgttgcagcgaaa
ccttttgttccaaatgtgaatgctgcagcctttgtcccttcgtttattaaatcagcacct
acaacccaacttcctgttgttcaaactcctgttgttcaatctcctattctcccagatgtt
ttggtgccaactgaagatattgtagatgactgggacaataatccagcagaagagaccaaa
gttcctgatgttgaagtttttcaggatgacagtaaatgccatgaggtttgtgacatacct
tctgaagttgcagttgaagaagaaagtatagttctaacagatactgtaggctgtaattta
gaggaagaacaagttgaatcactggctgaaaaaacaaggaaacctgcaaaaagcttttct
gcacccattgaaccagatgacaaaaaggatactattaatataatttttattgggcatgtt
gatgctggaaagtcaactattggtggccagttattgtttcttactggccaagtagataag
cgaactttggaaaaatatgagcgtgaagcaaaggaaaaaaatagagaaacatggtatttg
tcatgggcattagacacaaacatagaagaaagaaataagggaaaaacagttgagtgtgga
cgtgcttcatttgatactgagtctaaacattttgtacttcttgatgctcctggccacaaa
agttttgttccaaacatgattggtggtgctgcccaagctgatgtagcagttcttgttatt
tctgctagaaaaggggagttcgaaactggttttgaaaggggtggccaaactcgtgaacat
gctatgttggctaaaacatgtggtgtaagatttttgatagttctcataaataaaatggac
gatttgactgtgaagtgggataaagaaagatataacgaaattgtgtccaaactaacacct
tttctaaagaaaactgggttcaaagcctcagaaacaatttatatgccatgttctggtttt
actggactaaatttaaaagatcgtcttactttggaacaatgcccctggtatcaaggtcct
tcatttttagaacacttagatcaattacctagttttaaatggccatatgatgatccaata
aaagttttagtaagtgagcgttataaagacatgggtacaatagttattggtaaaattgag
tcaggaattatacgtaaaggggacacttgtactttaatgccaaataaaaattctgtaaaa
gtcataggtataacaggagcagatgaaattgaaaaaaatatgtgtaaagctggagagaat
gttaaactaaaattatctggcgttgaggaagatgaagttgttcctggttttgttttatgt
cacccagatcatctctgtaatactgcaagagtatttgatgcacaaatagtagtgttagaa
cacaaatctatcatatgtgcaggttacaaaggagttcttcatattcataatgcagttgaa
gaagtcatacttgttggtttaattcacacaatagacaagaaaaccggagagaaaagcgca
caacgaccaaggtttattaaacaagatacggttgctgttgctcgatttaaaactgcgaat
ctcatttgtatggaaacatttgcaaactttgcacctatgggacgtttcacacttcgcgat
gaaggtcgtacagtcgctatgggtaaagtgctttctttgcaccacaagaaagaagaaaca
gaaagcgaaaataaataa
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