Hydra vulgaris (swiftwater hydra): 100199816
Help
Entry
100199816 CDS
T01080
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100199816
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hmg01009
]
100199816
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100199816
03036 Chromosome and associated proteins [BR:
hmg03036
]
100199816
Protein phosphatases and associated proteins [BR:
hmg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100199816
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100199816
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100199816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_7
EF-hand_13
EF-hand_1
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
100199816
NCBI-ProteinID:
XP_012554832
UniProt:
T2M815
LinkDB
All DBs
Position
5:complement(54130685..54172654)
Genome browser
AA seq
448 aa
AA seq
DB search
MDWKSILKERNLRYQQEKGGKAFDHDKNDEHQLLLKYYEEYKAKLSSNNSSNSSGIPRFY
FKLPTDDDVLQQKLREESRAVFLQRKSKELLDNDELHELWNLLEKHSVPPPNGDEQMIDY
EGFLKVKEEAVSKCSQFFKPITYAKLFQKDRFGRISIMQFFNYVMRKVWLYQTRIGLSLY
DVAGQGFLRESDLENYILELIPTLPQLDGLEKNFYSFYVCTAVRKFFFFLDPMRTGKIKI
QDVLSCSFLDDLLELRDDVLSKDKQESNWFSAPSALRVYGQYLNLDNDHNGMLSKEELKR
YGTGTLTNTFLDRVFQECLTYEGEMDYKTYLDFVLALENKKEPQSLQYLFKILDVQHNGY
LNTFAINYFFRAIQKEMDKHGHEKVLLHDLKDEIFDMVKPADNMKITLQDLINSGQGDTV
VNILIDVNGFLTYENRELLVMEEKDEVI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggattggaaaagtattttaaaggaacgaaatctcagatatcagcaagaaaaaggagga
aaagcatttgatcatgataaaaacgatgaacaccaactattgttaaagtattatgaagaa
tataaagcaaaactgagttccaataatagctcaaatagctcaggaataccaagattttat
tttaagttaccaacagatgatgatgttttgcaacaaaagttaagagaagagtcacgagca
gtttttcttcaaagaaaaagcaaagaacttcttgataatgatgaacttcatgagctttgg
aatcttctagaaaaacatagtgttcctcctcctaatggtgatgaacaaatgattgattat
gaaggttttttaaaagttaaagaagaagctgtctctaaatgcagtcagttcttcaaacca
attacatatgcaaaattatttcaaaaagataggtttggaagaatatcaatcatgcagttt
ttcaattatgtaatgagaaaagtatggctttatcagactcgcattggtttaagtttatat
gatgttgctggtcaaggttttttaagagaatcagatttagaaaattacattctagagttg
attccaactcttcctcagttagatggtttggagaaaaatttttattcattttatgtatgc
actgctgttcgaaagttttttttctttcttgatcctatgagaactggtaaaataaagatc
caagatgttttatcgtgcagctttcttgatgacttacttgagcttagagatgatgtttta
tcgaaagacaaacaggaatctaattggttttctgctccatctgctttacgggtatatggg
cagtatttaaaccttgacaatgatcataatggtatgttgagcaaggaagaacttaaacga
tatggcactggtaccctcacaaatacatttttagatagagtctttcaagagtgtttaacc
tatgaaggtgaaatggattacaaaacatatttggactttgtgcttgcattggaaaataaa
aaagagcctcagtcgttgcaatatttattcaaaattcttgatgtccagcacaatggttac
ttgaacacttttgcaataaattactttttcagagcaattcagaaagaaatggataaacat
ggtcatgaaaaagtcttgttacacgatctaaaagatgagatatttgacatggtaaaacct
gctgacaatatgaaaataacgcttcaagaccttataaatagtggtcaaggtgacacagtt
gttaatattttaattgatgtaaatggtttcttgacatatgaaaacagagagctgcttgtt
atggaagagaaagatgaagtcatatag
DBGET
integrated database retrieval system
