Hydra vulgaris (swiftwater hydra): 100199898
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Entry
100199898 CDS
T01080
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03030
DNA replication
hmg03410
Base excision repair
hmg03420
Nucleotide excision repair
hmg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100199898
03410 Base excision repair
100199898
03420 Nucleotide excision repair
100199898
03430 Mismatch repair
100199898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmg03032
]
100199898
03036 Chromosome and associated proteins [BR:
hmg03036
]
100199898
03400 DNA repair and recombination proteins [BR:
hmg03400
]
100199898
DNA replication proteins [BR:
hmg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100199898
DNA Replication Termination Factors
ELG1-RFC complex
100199898
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100199898
DNA repair and recombination proteins [BR:
hmg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100199898
Check point factors
HRAD17(Rad24)-RFC complex
100199898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
RCF1-5-like_lid
Rad17
AAA_16
Viral_helicase1
nSTAND3
AAA_11
Mg_chelatase
AAA_24
RuvB_N
AAA_19
Gp44_lid
NTPase_1
MeaB
ABC_tran
ATPase_2
IstB_IS21
AAA_assoc_2
AAA_3
ORC-CDC6-like
AAA_5
RNA_helicase
MCM
AAA_28
SRPRB
AAA_18
AAA_25
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
100199898
NCBI-ProteinID:
XP_047141530
LinkDB
All DBs
Position
10:complement(23612629..23658790)
Genome browser
AA seq
366 aa
AA seq
DB search
MIGECRIFKFFLRETLNMDVDQKMDVDEFEKSSHIPTLKKNDPADKKSYELPWVEKYRPL
KLTDITGNEETIKRLQVFSEQGNVPNIIIAGPPGIGKTTSILCLARQLLSTSYKDAVMEL
NASNERGIDVVRNKIKMFAQQKVTLPPGRHKIIILDEADSMTSGAQQALRRTMELYSKTT
RFALACNQSDKIIEAIQSRCAVLRYTKLTDAQLLERLLDICEKEKVIKTDEGLEAIVFTA
QGDMRQAINNLQSTHTGFGFINPENVFKVCDEPHPILIKEMLNHCILSNIDEAYKVMAHL
WRLGYSAVDIITVIFRVCKNHDMAEFLKLEYIKEIGYTHMRIAEGVNSLLQMSGMLSRLC
QKSMKK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgataggcgaatgtcggatttttaaattttttttgcgcgaaacattaaatatggatgtt
gaccaaaaaatggatgttgacgaattcgaaaaatcttcacatatcccgaccttaaaaaaa
aatgacccagcagataaaaaatcttatgagcttccatgggtagaaaagtatcgtccattg
aaactcacagatattacaggaaatgaagaaacaattaaaagactgcaggtgttcagtgag
caaggaaatgttccaaatattataatagcaggcccaccaggtattggcaagactactagt
atcttgtgtttagcaagacaattgttatctacttcttataaagatgcagtcatggaactt
aatgcttctaatgaaaggggtattgatgtagttcgaaataaaattaagatgtttgcacag
caaaaagttacattaccaccaggtcgacacaaaattattattcttgatgaagctgacagc
atgacttctggagcacaacaagctttacgacgaacaatggaactttattcaaaaacaact
cgttttgcattagcatgtaatcagtctgacaaaataattgaggctattcaatcacgctgt
gctgtgttacgctacactaaacttactgatgctcaattgttagaaagacttcttgatatt
tgtgaaaaagaaaaggtaataaagacagatgaaggattagaagctattgttttcactgct
caaggagatatgagacaagcaattaacaatctccaatcgacgcatactgggtttggattt
ataaatccagaaaatgtttttaaggtgtgtgatgaaccacatccaattctcatcaaagaa
atgttaaatcactgtatattgtcaaatattgatgaagcttataaagtcatggctcactta
tggagattaggttattctgctgttgatataattactgttatttttcgagtttgtaaaaat
catgatatggcagagtttttaaaacttgagtatattaaagaaatcggttatacacacatg
agaatagcagaaggtgtcaactcacttttacaaatgtctggtatgctatcaagactttgt
caaaaatccatgaagaaataa
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