Hydra vulgaris (swiftwater hydra): 100200323
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Entry
100200323 CDS
T01080
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmg03009
]
100200323
Enzymes [BR:
hmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100200323
Ribosome biogenesis [BR:
hmg03009
]
Eukaryotic type
90S particles
Helicases
100200323
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
AAA_19
SecA_DEAD
Terminase_6N
Motif
Other DBs
NCBI-GeneID:
100200323
NCBI-ProteinID:
XP_047142763
LinkDB
All DBs
Position
10:25257529..25321219
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AA seq
651 aa
AA seq
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MVDTYSLFKKLGSGANFDLKRFKTDAEKFKILMRFRKKSMPSGSTSLTLNKLSSLLSILD
GCYFEITNYVYEKKFWLDKSCLNKFLSIQADLASNLLKPLKIISSSSSTIDKNDFIEELD
FFGTKKDCSKKDGSKTFFNETKTVIGDDVENVKIEDINKKKKKKRKLPDDGITLLSCKNK
KVKDKNVSKEKVNQQHIEKINIFRKEHLIHVYGFDIADPISSFLDLKERFNVPTIIMKNV
KENGFEVPTPIQMQAIPVILQHREMLACAPTGSGKTLAFILPILCHLKESKKTGIRAVIV
SPTRELSQQIYREFVRMNAGIGLKIDILTKAKINNFKSKACDILISTPNRLVHLLKQDFA
PDLGIVEWLVLDEGDKLFEDGEAGFRGQVALIYQACSNPSIKRLLFSATLANSVEDWCKD
HLDNVVRITVGNRNAATDTIDQELIFVGQESGKLLAIRQILHKGFQPPILVFVQSKDRAK
ELFNELVYDGLNVDVIHSDRTQAQRENIVKCFRTGKIWILIATDLMGRGIDFKGVNMVIN
YDFPSTTVSYIHRIGRTGRAGRRGKAITLFTEDDVVNLRSIANVVRSSGGEVPDWMLKLK
KLDSRTKKTLRKVPLERPHINTVSKYDAEKRNKKKQMIEQSKAKKKEKENS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggttgacacatatagcttgtttaagaagttaggaagcggagcaaattttgatttaaag
aggtttaaaactgacgcagaaaaatttaagatactaatgagattcaggaaaaagagcatg
ccatctgggtccacaagcctaacattaaataaattatcaagtcttctttcaatcttggat
ggatgttattttgaaataaccaattatgtctatgaaaaaaagttttggctagacaaaagc
tgtttgaataaattcttgtctatacaagccgacttggcttcaaacctgttaaagcctcta
aagataatatctagttccagttctactattgataaaaatgattttattgaagagcttgat
ttttttggtacaaaaaaagattgtagcaaaaaagatggcagcaaaactttttttaatgaa
accaaaactgttattggtgatgatgtagaaaatgtcaaaatagaagatataaataaaaag
aaaaaaaagaaaagaaagttaccagatgatggcattaccttgctaagttgtaaaaataaa
aaagttaaagacaaaaatgtatctaaagaaaaagttaatcaacaacacattgaaaaaata
aatatctttcgtaaggaacatctcatacatgtttatggttttgacattgctgatccaatt
tcatctttccttgatctgaaagaaagatttaatgttccgactatcattatgaaaaatgtc
aaggaaaatggttttgaagttcctactcctattcaaatgcaagctataccagtaatttta
cagcatcgtgagatgttggcatgtgcacctactggaagtgggaagacacttgcttttatt
ttaccaatcttatgtcatttaaaggagtcaaaaaagactggaattagagcagttattgtg
tctcctactagagaactttctcaacaaatttacagagagtttgttcggatgaatgctggt
attggattaaaaattgatatacttacaaaagccaaaataaataattttaaatcaaaagct
tgtgatattttaatatcaactccaaatcgattagttcatttgcttaaacaagactttgct
cctgatttaggaattgtggaatggttggttcttgatgaaggtgataaactttttgaagat
ggagaagctggatttagaggacaggttgctttaatataccaagcttgcagcaatccatct
attaaacgcctattgtttagtgcaacacttgcaaacagtgtggaagactggtgtaaagat
cacctagacaatgtagttagaattacagttggtaacagaaacgcagccactgatactata
gatcaagagcttatttttgttggtcaagaatctggtaaacttctagcaatacgtcaaatt
ttacataaaggttttcagccacctatacttgtatttgtgcaaagtaaagatcgagcaaaa
gaattgtttaatgaactggtttatgatggtcttaatgtagatgtaattcattctgaccga
actcaagcacagagagaaaacatagtaaaatgctttaggacgggaaagatttggatttta
atagcaacagatctaatgggtagaggaatagatttcaaaggagtaaatatggtcatcaat
tatgactttccatcaacaacagttagctatattcatagaattggacgtacaggtcgagct
ggtcgaaggggaaaagcaatcacactttttactgaagatgatgtggtaaatcttcgtagc
atagctaacgtggttcgatcctcaggtggcgaagttcctgattggatgcttaagcttaaa
aaattagatagtcgcacaaagaaaacacttagaaaagttccgttggaacgaccacatatc
aatacagtttcaaagtatgatgcagagaaacgaaataagaaaaagcaaatgattgaacag
tctaaagcaaagaaaaaagaaaaagaaaacagttga
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