Hydra vulgaris (swiftwater hydra): 100200373
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Entry
100200373 CDS
T01080
Symbol
LOC100200373
Name
(RefSeq) uncharacterized protein LOC100200373 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100200373 (LOC100200373)
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
100200373 (LOC100200373)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WDR90_beta-prop_4th
IBR
Zf-C2H2_ZNF451_1st
Motif
Other DBs
NCBI-GeneID:
100200373
NCBI-ProteinID:
XP_047126587
LinkDB
All DBs
Position
12:18566596..18651087
Genome browser
AA seq
1346 aa
AA seq
DB search
MSKLNCNISNVKTENNEENLSCIGQKQNLYSTPNFDNKNSKKLRIKRYSPIKSSPESISM
MIFIARPDILPISANFTTEKVKNKITLDMIRDNISIPIEVSSLQDDDESSVMLHHHSEHN
NGSLLDFFSVTVNEAEDIPIEVIKNSGKQSLEIDFTSKITEEEKDPIVVLEKSLSKYDFT
CPRQDCKEKFLRLSRLFTHMENCIDKVLLADMKSTLIKCPECQHKFCLKDLLSHFSKKHL
LLNWYFGQVDQGNWAICQNYKCGKYMDQVDDIVEHFRSCDYLWQCKHCFIEFQSEYKVRK
HCCQPTQKEYPEPKKSNKIEQDPCKNKYLAAKIKALQAKLGKKKYKKLNKSTEVVIKKES
NKSLDISLNKEQSSEVFSKASDICEVSTNTETNQSYEVSVNEKSNELNQDCTELINIKKS
YVLNNQQHTKKPKKKEINTFNKTISKIEDEHICTNNLVEINNILPKEISSEFIGQISHNH
TNNLKDINNVIEKEPSFEIVVKNKNFKKKKEKSTISCDTQDDLSRSKTYTLDLDNWSKQF
LEFNVVCPIIGCNGSFFLPWQLFKHLKTKCLMTPSLKDATAITDQLESMKFPCLISSCKK
YNEVFLLQDFCSHYRTIHMILFKLLYHVSRGTAQCFNYKCGAKIQTSKEALLHYERCKFL
WKCGSCSNEYQSLNSSRNHLCNKKVDLKDPLLCLDGKRKKRKSATVAISKLAEIAETKKR
KHNSDDGDDYVVDDCIGEDDDFVASSASSDVEEFVENELEDCNEVIRTRGDKSNLKLVYK
DNAFYEIWLKENMSDDVLFPEWLPRSDCLKVIPDSEYNQHLPSFSNIRNIEVEYFTDTKK
TSTKEFHSAELFKSFPKLKGSDTLGFNAGGPVWGLSWCPSKAEDDQILAVSTHRTHSEHY
TIVNMAATPGCIQIWNIGKLNQNISSLPRLSICICHSYGPIYSMEWCPSGCYTVVDEVKR
FGLLAVGCGDGKVRILSIPDPSSLIHNEPIFANLEPVITLLPQKLDAIEQIKTGLTLCVS
WLPSSGHSKLAAGYGDGGLRIWDLKTSSIFLKTDDQGKPALLPFRYIDAHSYSLRAVAWC
PYNTNIIATGSGDKHLKIFDINNPYLPVYCSKRESIFHLEWPKNRIGLFVSSDTCFNVLP
GSARYLVLEYFFNLQKCEADSIHLTTRHNAAVLSCSYNNRLDLLATCDIAGEVVVSKDQD
KACSKSATAIRKIEPVYRVECTTEKFSDEVIIDSPNEVTDKYIESLDIADLYYKLGPKFE
QEFQITQFKFIDSNKFEFSQNRMTNDPDVLRVSKYDNMAATVLEKIEKRAVQRIQWNPNE
GCNTWLASGTRMGVVRLHNFKAWASN
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaattaaactgcaatatttctaatgtgaaaacagaaaataatgaagagaattta
tcttgtattggacaaaagcagaacttatattcaactccaaattttgataataaaaacagt
aaaaaattacggataaaaaggtattctccgataaaaagcagtcctgaatcgattagtatg
atgatttttattgctagaccggacattttaccaattagtgcaaattttactactgagaaa
gtaaaaaataaaataactctagacatgattcgtgataatatctccattcctattgaagtt
tcaagtcttcaagatgatgacgaaagttctgttatgctgcatcaccatagtgaacacaat
aatggaagtttgttagattttttctcagttactgtaaatgaggcagaggatattcctatt
gaagtaataaaaaattctggtaaacaatcattagaaatcgattttacatccaagattaca
gaagaagaaaaagatcctattgttgttttggaaaaatcattatctaagtacgattttacc
tgtccacgacaagactgtaaggagaagtttttacgattatctcggttgtttactcacatg
gaaaactgcattgataaagttttattagcagatatgaagtcaacacttattaaatgtcct
gaatgtcaacacaaattttgtttgaaagaccttctgtcacatttttcgaagaaacacctt
ctgctcaattggtatttcggtcaagtagaccaaggtaattgggctatatgtcaaaattac
aaatgtggaaagtacatggatcaagtggatgacattgttgaacatttccgctcatgtgac
tatttatggcagtgtaaacattgttttattgaatttcaatcagaatataaagttcgaaag
cattgctgtcagccaacccaaaaagaatatcctgaaccaaaaaagtcaaacaaaatagaa
caagacccttgcaaaaataaatacttagctgctaaaataaaagcactacaagctaagcta
ggcaaaaaaaagtacaaaaaattaaataaatcaactgaggtagttataaaaaaagaatct
aacaaatcattagacatttcattaaataaagaacaatcatctgaagttttttctaaagca
tcagatatatgtgaagtttctacgaatactgaaactaatcaatcatatgaagtttctgtt
aatgaaaaatccaatgaacttaatcaagattgcactgaattaattaacatcaaaaaatca
tatgttttaaacaatcaacaacatactaaaaagccaaaaaaaaaagaaataaacacattc
aataaaactattagtaaaattgaggatgaacatatctgcacgaataatttagttgaaata
aacaatatattaccaaaagaaatttcatcggaatttattggtcaaataagccataaccat
acaaataatttaaaagacataaataatgtaatcgaaaaagaaccttcatttgaaattgtt
gtgaaaaataaaaattttaaaaagaaaaaagaaaaatcaacaatttcttgtgacacacag
gatgacttatcacgttctaagacatacactcttgatttggataactggtctaaacaattt
ctagagtttaatgttgtatgccccattattggttgcaatggcagcttttttttaccatgg
cagttatttaaacatttaaaaacaaaatgcctaatgactcccagtttaaaagatgcaact
gcaattacagatcaacttgaaagtatgaaatttccttgcttgatttcatcttgtaagaag
tataatgaagtatttttacttcaagatttctgttcccattacagaactatccatatgatt
ctttttaaattgttatatcatgtgtcacgcggaactgctcagtgttttaactacaagtgt
ggagccaagattcaaacctcaaaagaagcacttctacattatgagcggtgcaaattttta
tggaaatgtggatcatgttcaaatgagtatcagagtttaaactcttcaagaaatcacctt
tgcaataaaaaagttgatttgaaggatccactactgtgtttagatggcaagcgtaaaaaa
agaaaatctgcaacagttgcaatcagtaaacttgctgaaatagctgaaactaagaaaaga
aagcataattcagatgatggtgatgattatgttgtggatgattgcattggagaagatgat
gattttgttgcttcatctgcgtcttcagatgttgaagaatttgttgaaaatgaactcgaa
gactgtaacgaagtaataagaacacgaggtgataaaagtaatttgaagctggtttacaaa
gacaatgctttttatgaaatatggttaaaggagaacatgtctgatgatgtcctttttccg
gaatggctcccgagatcagactgtttgaaagttatccctgatagtgaatacaatcaacat
ttaccatcgttttcaaatattcgcaatattgaagtggagtattttacagatacaaagaaa
acttcaacaaaagaattccattctgctgaattatttaaatcgtttcctaaactgaaaggc
tctgatactcttggttttaatgctggagggcctgtctggggcctctcatggtgtccttca
aaagctgaggatgatcaaattttggcagtttcaacccatagaacacattcagagcactac
accattgttaatatggctgctacaccaggatgtattcaaatatggaatataggaaaactt
aaccaaaatatatcatcattgccgcgtttaagtatctgcatttgccattcatatggtcct
atatacagcatggaatggtgtccctctggctgttatactgtagttgatgaagtaaagcga
tttggtcttttagctgttggatgtggagatggtaaagttagaattttaagtataccagat
ccttctagtcttatacataatgaaccaatctttgctaatcttgaacctgttatcactttg
cttcctcaaaagttagatgcaattgagcaaataaaaactggactaacattgtgtgtttct
tggttaccatctagtggacactctaaattagcagcaggttatggggatggtggtttgaga
atatgggatttaaaaacatcatcaatatttcttaaaacagacgatcaaggaaaaccagct
cttctacctttccgatatattgatgcccattcttactcattgagagcagtggcttggtgc
ccttataatacaaatatcattgcaacaggatctggtgacaagcatttaaaaatatttgat
attaacaatccatatttaccagtgtattgctcaaaacgagaatcaatatttcaccttgaa
tggccaaaaaataggatcgggttgtttgtgtcttctgatacctgttttaatgttttacca
ggatctgctcgatatttagttcttgaatatttttttaatttgcaaaagtgcgaggctgat
tcaattcatttaacaactcgacacaatgctgctgttttaagttgttcttataacaatcgt
ctggatttattagctacttgtgatatagctggtgaagttgtagtttcaaaagatcaagat
aaagcttgtagtaaatctgcaactgctattcgtaaaattgagcctgtctatcgtgttgag
tgtaccacagagaaattcagcgatgaagtaattattgacagtccaaatgaagtaacagat
aaatatattgaatcattggatattgctgatttatactacaaattaggaccaaagtttgaa
caagaatttcaaatcacacaattcaaatttattgactcaaataagtttgaattcagtcaa
aatcgaatgacaaatgatccagatgttttgagagtttcaaaatatgataatatggctgct
acagttttggagaaaattgaaaagcgtgctgttcaaaggatacaatggaatcctaatgag
gggtgtaacacttggcttgcatcaggaactcgaatgggtgttgttcgtcttcacaatttc
aaagcatgggcatcaaattaa
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