Hydra vulgaris (swiftwater hydra): 100200520
Help
Entry
100200520 CDS
T01080
Name
(RefSeq) CXXC-type zinc finger protein 1 isoform X1
KO
K14960
COMPASS component SPP1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hmg03000
]
100200520
03036 Chromosome and associated proteins [BR:
hmg03036
]
100200520
Transcription factors [BR:
hmg03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
100200520
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
100200520
COMPASS/SET1 complex (yeast)
100200520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
p31comet
Motif
Other DBs
NCBI-GeneID:
100200520
NCBI-ProteinID:
XP_004207256
UniProt:
T2M429
LinkDB
All DBs
Position
13:complement(35284285..35350679)
Genome browser
AA seq
654 aa
AA seq
DB search
MNCDEFSQEVESNNHIEEEQDIEKENDVVKAENEKDTKLFCICRSSDIDRFMIACDKCME
WFHGDCVNIENKRAARKIEEWYCQQCLDSYEGLQIVFKDKRIEERKESQKKKKIENYDEK
FDDISKLEDKDFKRKRKNSDTLRRKNRTCGVCASCTNEMDCGQCDFCADMKKFGGPGKLR
QKCRAKQCLFLSRVRKKNDQVHREKKRRFKELSDSSDSVNTSLTTSTGKLLTNYLTLSPV
LEQEPNEQETDDLLIPQKDHCYSAPCQNNTEQMPNDKIPDDKIPIDKIPLEEHVKKKSLK
VKRATAKKMSYSERYSEPVKYENETNSKRETIPYHDKLATNRTTRSSRKEREVITAQQCL
GPGCVNSARNSSKYCSSECGIQLQIRRLQVILPTRMKSLQKGYHSTQLANEEIKKLRLIQ
KKCQDELVELDKLCHDLENLQEKSKGLSIQEEEENDEERDTDLDLTMYCVTCGVALAPRI
AFKHMEKCWAKVECLMSFGAVMRSAGNLFCDSYINAQGTYCKRLKVMCPEHFKETKIDSD
MVCGCPLVDSEFHETGKFCRISKRKCTRHVSWYRLRRGEIDLRRVHQWWKLEDALEQERQ
LRFEISNRNDVVGILLHDTIDHSEVLESNLTNDTSLNSIETEESLQSAFYEVDR
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtgatgaattttcacaagaagtggaatcaaacaatcatattgaagaagagcaa
gatattgaaaaagaaaatgatgttgttaaagctgaaaatgagaaagacactaaactgttt
tgcatatgtcgaagttcagacatagacaggtttatgattgcatgtgataaatgtatggaa
tggtttcacggagattgtgtaaatattgaaaacaaaagagctgcaagaaagattgaagag
tggtactgtcaacagtgtctcgatagttatgaaggtttgcaaatcgtttttaaagataaa
cgaatagaagaaagaaaagaaagtcaaaagaaaaagaaaatagaaaattatgatgagaaa
tttgatgatattagtaagttagaggataaagattttaaacgaaaaagaaagaatagtgat
actttacggcgaaagaaccgaacatgtggagtatgtgcatcatgcacaaacgaaatggat
tgtgggcaatgtgatttttgtgcggatatgaaaaaatttggtggacctggtaaactgagg
cagaaatgtagagcaaaacaatgtttgtttctttccagagtgaggaaaaaaaatgaccaa
gttcatcgagagaaaaaaagaagatttaaagagttatcagacagctcagattctgttaat
acatcactcactacgtctactggaaaattattaacaaactatctcacgttgtcacctgta
ttggagcaagagccaaatgagcaagaaacagatgatttgctgatacctcagaaagatcat
tgttattcagctccctgtcaaaacaatactgaacaaatgcccaatgataaaattccagat
gataagatacctattgataaaatacctcttgaagaacatgttaaaaaaaagagtctcaaa
gttaaacgagctactgcaaaaaaaatgagttatagtgagcgctactcagaacctgttaaa
tatgaaaatgaaactaattctaaaagggaaactataccttaccatgacaagcttgcaaca
aatagaacaactcggtcatctaggaaagaacgagaagttataactgctcaacaatgcttg
ggtccaggctgtgtgaactcagctcgtaatagttcaaagtattgcagcagtgagtgtggt
attcagctgcaaatacgtcgacttcaagttattttacctaccagaatgaaaagtctacaa
aaaggataccactcaacacaacttgcaaatgaggaaattaaaaagcttcgattaattcaa
aaaaaatgccaagatgaacttgttgaactagacaaactgtgtcatgatttggaaaattta
caggagaaatccaaaggtttgagtatacaggaggaggaggaaaatgacgaagagcgtgat
accgatcttgatctcactatgtactgtgttacatgtggagtagcattggcaccaaggata
gcttttaaacatatggaaaaatgttgggccaaagtagaatgtttaatgtcatttggggct
gttatgcgaagtgctggaaatttattttgtgacagttatataaatgcacaaggtacatac
tgcaaacgactcaaagttatgtgtcctgagcacttcaaagaaacaaaaattgattctgat
atggtttgtggatgtccacttgttgacagtgagtttcatgaaacaggaaagttttgcaga
atatctaagcgtaaatgtacacgccatgtatcttggtatagacttaggcgaggagaaatt
gatcttagaagagttcatcagtggtggaaacttgaagatgctttggagcaagaacgtcag
cttcgatttgaaatttcaaatagaaatgacgttgtcggaattttgctacacgatacaata
gaccactccgaagtattagagagtaatttaacaaatgatacgtcgttgaattcgattgag
actgaagaatccttacaaagcgcgttttatgaagttgacagataa
DBGET
integrated database retrieval system
