Hydra vulgaris (swiftwater hydra): 100200614
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Entry
100200614 CDS
T01080
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hmg03041
]
100200614
Enzymes [BR:
hmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100200614
Spliceosome [BR:
hmg03041
]
Complex C
Other components
Complex C specific factors
100200614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_19
AAA_22
Cas3-like_C_2
T2SSE
nSTAND3
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
100200614
NCBI-ProteinID:
XP_002160697
UniProt:
A0A8B6XMU5
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All DBs
Position
2:32691804..32694241
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AA seq
699 aa
AA seq
DB search
MLNKKNIFWKPGAEKPGIDLRTERQSEGEGAGSFMIYNPNNLLSIQQQRQRLPSFKYRNA
VLYLLEKYQTVIISASTGSGKSTQIPQYLYEAGWTNEKKIIGITQPRRVAVTSVASRVAE
EMGTALGREVGYSIRFEDCTDKDLTKIKFLTDGYLVREMMADPLLSQYSVLMLDEVHERT
LYTDVIIGLLKKILRKRPDLRLIISSATLDADQYQKFFNIKKSVNKAEVTSVILEMEGRT
FPVDIFYLQAAIPNYVKSAVDTVINIHKSYSDGDILVFLTGQDEVENALQLIQNEINLLP
KNIQNVLLLPLYGGLPMAEQLKVFQRAPPNTRKVVVSTNVAEASITISGIVYVIDSGFVK
LKAYNAASGLDSLVITPISKASAAQRSGRAGRVRAGKAYRLYPECEFDKLSLFTIPEIQR
TNLASVILQLKSLGISNVLRFNFLSAPPAQLMINGIELLFALGALTEEGNLTEPLGVQMA
EFPLNPMLSKMLLCSGNFQCSEEAVTLAAMLQIENVFVAVPNMKNKVTRSKLRFAAKEGD
HLTLINVYRAFIKHGKSMDWCHKHFLNYKSLVRVVKVRNQLISILKQYDIPIVSCKEDDE
AIRKCIISGFFANVAKYHPSGEYRTVRDNRSLYLHPSSVLSSITPPPKLLIFNEVLCTSK
DYMRDATDIKLSWLLELASSYYEYDTDLAMDRKKLKLDI
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgttaaataaaaagaatatattttggaaaccaggtgctgaaaaacctggtatcgattta
aggaccgaaaggcaatcagagggtgaaggagctggaagttttatgatatacaatcctaat
aatttattatctattcaacagcaaagacaacgacttccatcttttaagtatcgcaatgct
gtgttatacctactagaaaaatatcaaactgtgattatatctgcttcaactggatctgga
aaatctacacaaattcctcaatacctatatgaagctggttggactaatgaaaaaaaaatt
attggcataacacaacctcgtcgtgttgcagttacttctgttgctagtagagtagctgaa
gaaatgggaactgctttaggaagagaggtagggtattcaattcgtttcgaagactgtact
gataaagatttgacaaaaattaaatttcttaccgatggttatttggtgagagagatgatg
gctgatcctttgctttctcagtacagcgttttaatgttagatgaagttcacgaacggaca
ctttatactgatgttataattggattgctcaagaaaattttgcgcaaacggccagatctc
cgattgatcatttcttctgccacattagatgccgatcagtaccaaaaattttttaatata
aaaaaatctgttaacaaagccgaagttacatctgttatattggaaatggagggtaggact
tttcctgttgatattttttatcttcaagctgctatcccgaattatgtgaaatctgctgta
gacactgtcataaatatacataaatcatattcagatggagatatattagtatttcttact
ggtcaagacgaagtagagaatgccttacaacttatacaaaatgaaattaatttgttgccg
aaaaatatacaaaatgttttattacttcctttgtatggtggtttacccatggctgaacag
ttaaaggtttttcaacgtgctccccctaataccagaaaagtagttgtttcgactaatgtc
gctgaagcatcaattactataagtggtattgtttatgttatagactctggttttgtcaag
ttaaaagcatacaatgctgcatcaggattagactctcttgtgataacacctatatcaaaa
gcatcagctgctcaacgatcaggaagagctggtagggttcgtgctggaaaagcatatcgt
ctttatccggaatgtgagtttgataaattaagtttattcaccattccagaaatacaaaga
actaatttagcctccgttattttacaattgaaaagtttaggaataagtaatgtattgaga
ttcaattttttaagtgcgccaccagctcaactcatgataaatggcatagaacttctgttt
gcacttggtgcactcaccgaagaaggtaatttaacagagcctttaggcgtccagatggct
gagtttcctttaaatccaatgctttctaagatgcttttgtgctctggaaattttcaatgt
tctgaagaagctgttacgctagcagctatgcttcagatcgaaaatgtttttgttgccgtg
cctaacatgaaaaataaagtgaccagatcaaaacttcgctttgctgcaaaagaaggagat
catttaactctcattaatgtttatcgtgcttttattaaacatgggaagagcatggattgg
tgccacaaacattttttaaattataaatctcttgttcgtgtagtaaaggtaagaaatcaa
ttaatatctattctaaagcagtacgacattccaatagtttcgtgtaaagaagatgacgaa
gctattcgaaagtgtattatatctggattttttgcaaatgttgctaaatatcatccctct
ggtgaatatagaacagtacgtgataatcgttcgttatatttgcatccatcatcagtgctt
tcgagtattacgcctcctccgaaactccttatatttaacgaagtcctttgcacttcaaaa
gattacatgagggatgctacagatataaaactgtcttggttgttagaattagcaagttct
tattatgaatatgatacagatttagctatggatagaaagaaactaaagcttgatatataa
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