Hydra vulgaris (swiftwater hydra): 100200861
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Entry
100200861 CDS
T01080
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
hmg
Hydra vulgaris (swiftwater hydra)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_14
LRR_8
LRR_4
PDZ_6
PDZ_2
LRR_1
LRR_13
LRR_LRWD1
LRR_Zer-1
DUF6288
Motif
Other DBs
NCBI-GeneID:
100200861
NCBI-ProteinID:
XP_047145373
UniProt:
A0A8B6XYU1
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Position
12:1612918..1682911
Genome browser
AA seq
1342 aa
AA seq
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MWKCGSGLFAFRKRWHPRNLDYLDKSHCSLTTVTEDILRHAGTLEELSLEGNQLTDLPKG
IFRMTKLRRLILADNEIQDLTNDISSLIALEELDFSKNDVRVVPDSIQNCKKLTFLDISS
NTLGELPDSLTKLNQLKTWIANDIALTEIPPEIGSLSNLVVLELRENCIKFLPLSFSFLS
KLERLDLGGNELEELPDTIGQLTCLIELWLDNNFLTTLPSEIGELKALQCLDVSENRIEE
LPEEISTLTSLTDLHCTSNALHELPQGIGCLIKLQILKVDQNEIDEITDCIGGCTNLLEV
VLSENVIEFLPAAIGKLSNLTLLNIDRNRLFTFPPEIGNCTKLSVLSARDNQIVKIPKEI
GSCKSLTVLSLSGNKLESLPFAVSTLPLKALWLSQNQSQSVLKLQVEDDEITSEKILTCF
LFPQEKLKCSSIDDLDKDFEPEHEKSETQTAVKFPETAVEKESNLQRHDTPYPKELRSRH
PHLIRKRSQSPESEHSRPVSATSATLNHVNLPEEKSVTKQTDQINTSVKLNLQSGVDNSA
VLNGIDNSVVTNGIDNLAALSGNSAEEEHSEENSSEDSSSDDEDGKKRIRFNVEENVNDE
HCKLFRKDTPHFLKGKRIVQDSGGFQEILSIIEQNKNHSVDHENEEKFSKECTFENVEAV
MNGKKKNLRKYKRQDTPTINNFSKSLPVQKPSGGLIFEEEEEGSEDVDEEEDNDEEVCED
DNEDDNEANEDIENETVTKVYEELSTLLTRDGQSLGINIAGGIGTNTFQEDEQLVSSGSN
VDLFLDEGIFITKVVVDGPAYKDGVLKVGDKIIKVNGVDISNYNHKEAVAVLKESGDKVQ
LVVLREVTDEDQINLALNNQREKSVRFAAEPEVEDIEIETLTIPVVLIRDAKGLGFSIAG
GKGANPYNNKNDEGIYISKITDNGPAALDNRLQVGDRLLSINNVDVREAKHDDVVKILVN
ATEKVSLVAHRERVIHKKMKPLSQINGNVKTIGETTKVELIPDERGEEPKLLVEEILLKK
TSGPLGMSIVGGSDVVSHPFGVNEPGIFVSKIMSTGEAAKTNLCIGDRILRVNDKDMRRA
SHQEAVAALISNDPEIKLLVRHDPPPPGLKEVKISKKLGEKLGISIRGGAKGHPGNPFDK
DDEGIFISKVNSSGAASRDGRLKVGMRILEVNGISLLGATHVDAVRALRTAGDILTTVVC
DGYDEQAASVLIEENIFFNPSLCESRFSPDSQSSATSGDLSDGGYERITYHHHNDQPKVD
ESYKEAEILAWTRVERSSSEQRTLDAEKRAKLRQETIDALDTDARKAKQVITKSKELSTS
SLENSLIDRDILRERNIVGSVV
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaatgtggcagtggtttatttgcatttcgcaaaaggtggcaccctagaaattta
gactatctagataaaagtcactgtagtttaacaactgtaaccgaagatatcttgcggcat
gctggaactctggaagagttatctttagagggaaatcagttaaccgatttgcctaagggt
atatttcgaatgacaaagttacgtcgtctgattttagctgataatgaaatacaagatctc
acaaatgatataagcagtttaatagcattagaagaactagattttagcaaaaatgatgtt
agagtagttcctgactccatacaaaactgcaaaaaattaacttttttggacattagtagt
aacacattaggagaactaccagactcgcttactaaacttaatcaattaaaaacttggatt
gctaatgatatagcactaacagaaataccacctgaaataggaagtttgtcaaatttggtg
gtccttgagctccgagagaactgcattaaatttttgcctttatcgttttcatttctttcc
aagttagaaagattggatctcggtggaaatgaacttgaagaactacctgatactattggt
cagttaacatgtcttattgagttatggttagacaataactttttgaccactttacctagt
gaaatcggcgagttaaaagcattacagtgtttagatgtttcagaaaatcgcattgaagaa
cttcctgaagaaattagtaccttaacttctctcacagacttgcactgcacttctaatgct
ttgcatgaactacctcaaggcataggatgtttgattaagcttcaaatacttaaagttgac
cagaatgaaattgatgaaataacagactgcataggaggctgcactaatttgcttgaagtt
gttctttcggaaaatgttattgagtttcttcctgcggcaattggtaaactgtcaaactta
actctacttaatattgatcgcaatcgtttatttacattcccgcctgagattggaaactgt
actaaacttagtgttttatcagctagagataatcaaattgttaagattccaaaagaaata
ggatcatgtaaaagtttgacagtattatcactgtcaggaaataagttagagagtcttcca
tttgcagtttcaactttgccattaaaagcattgtggttatcacaaaatcagtcacaatca
gttttgaaactacaagttgaagatgatgaaattacatcagaaaaaatccttacttgtttt
ttatttcctcaggaaaagcttaaatgttctagtatagatgatttggacaaagactttgag
cctgaacatgaaaagtcagaaactcaaactgctgttaagtttcctgaaactgcagtggaa
aaagaatctaatcttcaacgtcacgacacaccttatcctaaagaattacgtagtagacat
ccacatttaatcagaaaaagatctcaatctccagagagtgaacacagcagaccagtatca
gctacttctgctactttaaatcatgttaatttaccagaagaaaaatctgttacaaaacaa
acagatcaaattaacaccagtgttaagttaaatctacaaagtggtgttgacaattcagca
gtattaaatggtattgacaattcagttgtaacaaatggtattgacaatctagcagcatta
agtggcaattctgctgaagaagaacatagtgaagagaattcttctgaagatagcagtagc
gacgatgaggatggaaaaaaacgcattcgatttaatgtggaagaaaatgtgaatgatgaa
cattgtaaattgtttcgcaaagacactccacattttctcaagggtaagcgaattgttcaa
gatagtggtggttttcaggagattttatcaataattgaacaaaacaaaaatcattcagtt
gatcatgaaaatgaagagaaattctcaaaggaatgtacctttgaaaatgttgaagctgtt
atgaatgggaaaaaaaaaaatttacgcaaatataaaaggcaagatacacctactatcaat
aatttctccaaaagcttgcctgtacaaaaaccatctggtgggctcatttttgaagaagag
gaagaaggaagcgaagatgtagatgaggaagaggataacgatgaagaagtatgtgaagat
gataatgaagatgataatgaagcgaacgaggacattgaaaatgagactgttacaaaagtt
tatgaagaactttcaacattgctgacaagagatggccaaagcttgggtataaatattgct
ggaggaataggtactaacacttttcaagaagatgaacagttggtttcgagcggaagcaat
gttgacctgttcctagatgagggaatttttataactaaagttgttgttgacgggcctgca
tataaagatggtgttctcaaagttggtgataaaataataaaggtaaatggcgttgacata
tctaactacaatcacaaggaagcagttgcagtattaaaagaaagtggtgacaaagtacaa
cttgttgtattgcgtgaagttactgatgaagatcagatcaatcttgcacttaataaccag
agagaaaaaagtgtcagatttgcagcagaacctgaagttgaagatattgaaatagagact
ctgacaatacctgtggtacttatcagagatgcaaagggcctaggattcagtatagctggt
ggaaaaggtgctaatccatataacaacaaaaatgatgagggtatttacatcagtaaaata
acagataatggtcctgcagcacttgataatcggttgcaagttggagatagattgttatct
ataaataatgtagatgttcgtgaagcaaagcatgacgatgttgttaaaattcttgttaat
gcaacagaaaaagtttcattggttgctcatcgagaacgagttattcataaaaaaatgaaa
ccattgtcacaaattaatggtaatgttaaaacaattggtgaaacaactaaggttgaactt
attcccgatgaaagaggagaagaaccaaaacttttagtagaggaaatcttgctaaaaaaa
acttctggtcctcttgggatgagtattgttggtggttctgatgttgtgtcacacccattt
ggtgttaatgagccaggaatatttgtgtccaagataatgtcaactggtgaagcagctaaa
actaatctttgcattggtgatagaatacttagagtcaatgacaaagatatgaggcgtgca
tcacatcaagaagctgtagccgcacttatttcaaatgatccagaaattaagttgcttgtt
cgccatgatcctccaccacctggattaaaagaagtaaaaatttcaaaaaaacttggtgaa
aagttgggaataagtatacgtggtggtgccaaaggacaccctggaaacccatttgacaaa
gatgatgagggtatatttatatccaaggttaattcatcaggagcggcttcacgagatggg
agattaaaagttgggatgagaattttagaggttaatgggataagtcttctgggtgcgact
catgttgatgctgtaagagctttaaggacagcaggagatattttaacaacagttgtttgt
gacgggtatgatgaacaagctgcatcggtacttatcgaagaaaacatattttttaatccg
tccctatgtgagtctcgtttttctcccgattcccagtcttcagctacctccggtgacctt
tcagatggcggatatgaacgaataacttaccatcatcacaacgaccaacctaaagtggac
gaatcttacaaagaagccgaaattttagcgtggacgagagtagaacgttcaagtagtgaa
caacgtacactcgatgccgaaaagcgagctaaattacggcaagaaacaattgatgctcta
gataccgatgctaggaaggcgaagcaagtaattactaaaagtaaagaactttctacttcc
tccctcgaaaattctttgattgaccgtgatatattacgcgagcgtaacatagttggaagt
gttgtataa
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