Hydra vulgaris (swiftwater hydra): 100201157
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Entry
100201157 CDS
T01080
Name
(RefSeq) RNA-binding protein 39 isoform X7
KO
K13091
RNA-binding protein 23/39
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hmg03041
]
100201157
Spliceosome [BR:
hmg03041
]
Common components
Common spliceosomal components
General mRNP proteins
100201157
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
100201157
NCBI-ProteinID:
XP_002159647
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All DBs
Position
1:30881748..30899858
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AA seq
528 aa
AA seq
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MTANDDFDVDDLLEAPYKKPEENGNDDGKKSGTDSGDDNRKKKKSKDDRKSRDSKRSRSR
SKDRKKKSRSRSRDRRRDKRSRSPRRRSRSTSYERRRHERRSRSPRRRSRSTSYERQRRR
SRSPRRSPRRSPRRSPRRSPRRGPSSDREVIRRSRDGVTTISLLSDREREWDEEHVSQEE
RDSRTVFIMQLAKQVTIRDIQDFFSKVGQVRDVRLISDRNSRRSKGIGYVEFTDASAVTL
AIKLSGQKLLGVPIMVSPTMAEKNRYAAAQAALVKPQGPMKLYVGSLHYNITEPMLRAIF
EPFGTVESVQLQYDSETNRSKGFGFVNFREAGAAKRAMEQMNGFELAGRPMKVNTVSERT
DGSMSFLDDEETEKGGIEMNAQSRASLMQKLAQTHGSGLQVPTAPIIPAMLPTPMMNVAG
STCLILSNLFDPRKETESDWELDIRNDVLEEVTKMGIVVHISIDKISAEGNVYIKTLIPD
TAQKILQTFNGRWFAGRTIRAVAIPVANYNTMFPEAATAVRSLKPDPR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaacgatgactttgatgtggatgatttgctagaagctccatataaaaagcca
gaggaaaatggaaatgatgatggaaaaaaaagtggtactgatagtggagatgataacaga
aagaaaaaaaaaagcaaagatgacagaaaatcaagagattcaaagcgtagtcgatcaaga
tcaaaagatcgcaaaaaaaaaagccggtcccgctctcgagatagaagaagagacaagaga
tcaagatctccaagaaggagaagtcgttctacttcttacgagcgtcgaagacacgaaagg
aggtcaagatctccgagaaggagaagtcgttcaacttcttatgaacgccaaaggagaaga
agtcgatctcctaggagaagcccaagaaggagtcctagaagaagtcccagaagaagtcct
agacgaggtccttcaagtgatcgagaagtgattcgtcgtagtagagatggggtgactaca
atttcattgctatctgatcgtgagcgagaatgggatgaagaacatgtttctcaagaagag
cgtgattcccgcactgtttttataatgcagttagctaaacaagttaccattcgtgatatt
caagattttttcagtaaagttggacaagttcgggatgttcgcctgatatcagatagaaac
tctagacgatctaaaggaattggttatgttgagtttacagatgccagtgctgttactttg
gccataaaattatctggacaaaaacttcttggagttccaataatggtatcccctacaatg
gctgaaaagaaccgttatgctgcggctcaagctgctttagttaaaccgcaaggtcctatg
aaactttatgttggatctctgcattacaatatcactgagccaatgctaagagctattttt
gaaccttttggaactgttgaaagtgttcaattgcaatatgattcagaaaccaatcggtca
aagggatttggatttgtaaactttagagaagctggtgctgcaaaaagagcaatggagcaa
atgaatgggtttgaattagctggacgaccaatgaaagtaaatactgtttcagaaagaaca
gatggttctatgtcttttcttgatgatgaagaaactgaaaaaggaggaatagaaatgaat
gcacaatcacgagcatcgcttatgcaaaaacttgctcaaactcatggttcaggtttacaa
gttccaactgctcctatcatacctgctatgcttcctactcctatgatgaatgttgctgga
agtacctgtttaatattatctaatctgtttgatccaagaaaggagacagaatctgattgg
gaattggatattagaaatgatgttttagaagaggttactaaaatgggaattgttgtccat
atctcaattgataaaataagtgctgagggaaatgtatacattaaaacacttattccggat
acagctcaaaaaatattacagacattcaatggaagatggtttgcaggtcgaactattcgt
gcagtagcaattcctgtagctaattataatacaatgtttccagaagctgccactgctgtc
agatcgctcaagccagatccgcgttag
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