Hydra vulgaris (swiftwater hydra): 100201209
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Entry
100201209 CDS
T01080
Symbol
LOC100201209
Name
(RefSeq) UV excision repair protein RAD23 homolog B isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03420
Nucleotide excision repair
hmg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100201209 (LOC100201209)
09124 Replication and repair
03420 Nucleotide excision repair
100201209 (LOC100201209)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
hmg03051
]
100201209 (LOC100201209)
03400 DNA repair and recombination proteins [BR:
hmg03400
]
100201209 (LOC100201209)
Proteasome [BR:
hmg03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
100201209 (LOC100201209)
DNA repair and recombination proteins [BR:
hmg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
100201209 (LOC100201209)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_Ucp12
UBA_9
UBA_RAD5A
Crinkler
Rad60-SLD_2
LRV_2
FucT_N
Dsc3_N
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
100201209
NCBI-ProteinID:
XP_002169219
UniProt:
T2MFN5
LinkDB
All DBs
Position
07:complement(28728444..28746579)
Genome browser
AA seq
343 aa
AA seq
DB search
MLITLKTLQQKTFKIEVDENDKVFALKELIAKEKGSEFPIECQRLIYSGKILDDDKALCE
YNIDPVKNFVVVMSVKPKVVTKDGDKSSGVGSSTPQVESTVSMETVQPSSTPLLTSTASA
SETTSVSTTSTAVSSQPDIGTSFLTGSALDSSINELMSLGFSREQVLRALQRSFQNADRA
AEYLLSGNVPELVEDAPGDIDEESEALPADVGAEGDLNFLRDLPQFRMMRSQVQRHPDTL
PQLLQEIGRSNPQLLQLISQNQEAFIALLNEPETGESSAPVSEDAFGGDAGAGGGFQIHV
TTEEKAAIDRIVGMGFNEAEVIQAFFACEKNEQLAIEFLLSSI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgttgattactttaaaaacgctgcaacaaaagacgtttaaaattgaagttgacgaaaat
gacaaggtttttgcacttaaagaattgattgctaaagaaaaaggatcagagtttccaatt
gaatgccagcgactaatttattcgggtaaaattcttgatgatgataaagctttatgcgaa
tataacattgatccagtcaaaaactttgtagtagtaatgtcagtcaagcctaaagttgta
acaaaagatggggataagtctagtggagtaggatctagcacgccacaagtagaatccact
gtctctatggaaacagttcaaccatcatccacaccacttttgacatctactgcgtctgct
agtgaaacaacttcagtatccacaacctcaacagctgtttcctctcaacctgatattgga
acttcatttcttactggatcagctcttgactcatcaataaatgaactaatgtctcttggc
tttagtagagagcaagttttaagagctcttcaacgaagttttcaaaatgcagatagagct
gcagagtatttgttatcggggaatgtgcctgaacttgttgaagatgcgcctggtgacata
gatgaagaatcagaagctcttcctgcagatgttggcgctgaaggtgatctaaacttcctt
cgagatcttccacaattccgtatgatgcgatctcaagtgcaacgtcatcctgatactttg
ccgcaattattgcaagaaattggacgctcaaatccccagttattacagcttattagtcaa
aatcaagaagcattcattgctcttctaaatgaaccagaaacaggcgagagttcagctcct
gttagtgaagacgcttttgggggcgatgctggcgcaggaggaggatttcaaattcatgtt
acaactgaagaaaaggcggctattgataggattgttggcatgggttttaatgaagcggaa
gttattcaagctttctttgcttgcgaaaaaaacgaacaactcgcaattgaatttttatta
agttctatataa
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