Hydra vulgaris (swiftwater hydra): 100201232
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Entry
100201232 CDS
T01080
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03440
Homologous recombination
hmg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100201232
03460 Fanconi anemia pathway
100201232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmg03400
]
100201232
DNA repair and recombination proteins [BR:
hmg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100201232
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
HHH_8
EME1-MUS81_C
MutL
Motif
Other DBs
NCBI-GeneID:
100201232
NCBI-ProteinID:
XP_047133226
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Position
5:complement(41066061..41102947)
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AA seq
828 aa
AA seq
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MSRKSRKSCANPMFLLWLEEWQKDAEEKGLNSKWTYSKAISSIKKYPLPLRSGKEAKILE
NIGDGIAKKLDQRLAEYLDSGGDYKSLHQMNTSLQSPCSPPKKTKKNILVNASSGSSLDK
PFAGPQCSDANGKTKQYIPKFRSGPYALLVTIYEESQKSSYVGYLLKQELQKKAQHLCDK
SFTLPDSGSRYTAWSSMSKLIEKGYITKVGSPAKYHITSSGCELSQLLLRLNNDPSSVQS
NDFSIKNSYGTLASQSSKVVCKDQFLKESRLQLSEGIGASLSTTKLFISNKNNNTKHSSP
LLNEVINIEEEVCIEAACTEKHCSPLLNEVINIEEKVCIEAACTEKDACVSIEKLRYWYI
SENNEKTLFKSKALVTVDDDFGLGFLIKVKLFELEASGALFKIDLSRPSEGDFHFVMISD
NDCRDVAVPPADCHEAAVSNKKANQNKHNIKKDLLLRIKEKSTALKFKETEFNSTSNKVI
PKDKYDMSSSFTMVKSSTNYLNGNYNEIKSREIRDQDLFSSRKITEIVKNVLSTEPPLFC
FKPGTFRVILCVDNSETLGSGKRKKEMADKLSQSGIPIDTRKLQVGDFLWIAKENSGLER
ELVLDFIIERKRMDDLASSICDGRFKEQKFRLKNCGLLKLIYMVESYKNAKHLPIPEQSL
YQSITNTQVIDGFFIKETNDLFHSAEYLKIMTNQLINLYKNKTLFAARMDLVKEIKKNAI
CEEVLQHDEQYLITFEEFSSQTDKNKVLLVKEMFVKHLTQIKGMSVDRALAIVKIYSTPS
ILVSAYENCSSDSEKENLISSIQFGTLQRKIGNALSKQVYFVYSNKKS
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggaaaagtagaaaaagttgtgcaaatccaatgtttcttttgtggcttgaagag
tggcaaaaagatgcagaggaaaaaggtttaaattctaaatggacatactctaaggctata
tcctctattaaaaagtatccgctgcctttgagatcaggtaaagaggcaaagatccttgaa
aatataggggatggtatagctaagaagcttgatcaaaggcttgcagagtatttggatagt
ggaggagattataaaagtttacatcagatgaatacaagtcttcaatccccttgctcccca
ccaaaaaaaacaaagaaaaatatacttgttaacgcatctagtggttcttcgctggataag
ccatttgccggtcctcagtgctcagatgctaatggaaaaacaaagcaatatattcctaaa
tttcgatcaggtccatatgcacttctcgttactatttatgaagaatctcagaagtcttcc
tatgttggatatttgttaaaacaagagcttcagaagaaagcacagcatctttgtgataag
tcatttactttgccagatagtggatcacgttatacagcctggtcatccatgagtaagttg
attgaaaaggggtatataactaaagttggcagcccagcaaagtatcatattacttcatct
ggatgtgagttaagtcaactccttctgagactcaataatgacccgtcttctgttcaatca
aatgattttagtattaaaaattcttatggaacacttgcctcacagtcatcaaaagtggtt
tgtaaagatcaatttttaaaagaaagtcgtctacagctcagtgaaggtattggggcatct
ctttccacaacaaaattgtttatttcaaataaaaataataatacaaaacactcttcacct
cttttaaatgaagttataaatatagaagaggaggtctgtattgaagctgcttgtactgaa
aaacactgttcacctcttttaaatgaagttataaatatagaagagaaagtctgtattgaa
gctgcttgtactgaaaaggatgcttgtgtatctattgaaaaattgagatactggtatatt
tctgaaaataatgaaaaaaccttgtttaaatctaaggctttggtgacagttgatgatgac
tttggacttggtttcttaattaaagttaaattgtttgagctagaagcttctggtgcttta
ttcaaaatagatttgtccagaccttcagaaggtgattttcattttgttatgatttcagac
aatgattgtagagatgtagctgttcctcctgcagactgtcatgaagcggctgtttcaaat
aagaaagctaatcaaaataaacacaacattaaaaaggatcttttattgcgtataaaagaa
aaaagcacagctttaaagtttaaggaaactgaattcaattctacgagtaataaagttatt
ccaaaagataagtacgatatgtcttcttcttttacgatggtcaagtcatctaccaattat
ctaaatggtaattataatgaaataaaaagtagagaaattcgagatcaagacttattttca
tctaggaaaatcactgaaatagtaaaaaatgttttatcaacagaaccccctttgttttgc
tttaaaccaggaacttttcgagttattttatgtgtcgataattcagaaacgttagggagt
ggcaaaagaaagaaagaaatggcagacaagttgtcacaaagtggtatccctatagatact
cgtaagctgcaggttggtgattttctttggattgcaaaagaaaattcaggtttggagcgt
gagctagtattagattttattattgaaagaaaaagaatggatgatctggcatcaagtatc
tgtgatggaaggttcaaggaacaaaagtttcgtttaaagaactgtggtttattgaagtta
atatatatggtggagtcatacaaaaatgcaaagcatctacctattcctgaacagtctctt
tatcagtcaattacaaatactcaagttatcgatggcttttttatcaaagaaactaatgac
ttgtttcactcagcagaatatttaaaaattatgactaatcaattgatcaatctatataag
aacaagaccttgtttgctgctcgaatggatttagttaaagaaattaaaaagaatgcaatt
tgcgaagaggttctgcaacatgatgaacaatatttgattacgtttgaagaattttcttca
caaactgataaaaacaaagttttgttagtcaaggagatgtttgtaaaacaccttacgcaa
atcaaaggaatgtctgtagatcgagctttagctattgttaaaatatattccactccatct
atccttgtcagcgcttatgaaaactgctcttctgattcagaaaaagaaaatttgataagc
tctatccaatttggaacattgcaaagaaaaattggtaatgcgttgagtaagcaggtgtac
ttcgtttattcaaataaaaaatcatga
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