Hydra vulgaris (swiftwater hydra): 100201361
Help
Entry
100201361 CDS
T01080
Symbol
LOC100201361
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03013
Nucleocytoplasmic transport
hmg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100201361 (LOC100201361)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100201361 (LOC100201361)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100201361 (LOC100201361)
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100201361 (LOC100201361)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
100201361
NCBI-ProteinID:
XP_002155558
LinkDB
All DBs
Position
02:43176887..43191573
Genome browser
AA seq
1278 aa
AA seq
DB search
MVFGCHLPPFRMQNGVVRSKNVILKNVLIIKKVKSEMYNNNVVLNDKSRKIKSHSSKSHR
ANPYTKNRNVHLEKKSDVEQGILGRVSNYIVPNWISSWWKKDKNEENSGFSENDESDESD
ENNAQSSQPQIIKSNENHKIKSLSYEGTQNSNSIVQSTAVKPPSLGFYDKVGNSDNTLNH
PSFLDNSFDSVQFYPSKQSFSNDEKVIEVSHSNSVKQKSPFVLKPAFNVSAFISPNLSAQ
NFNTTMNTTLDLSAVNKSLFYSGQTKFGGSSTYRQDSIKRQRISPVSNQACTTLTQMKAK
SLPYAKRNAVTSATAKKILSTLDNMSSPVKDSRKLPSMQHLISPLTFSQKLRDLSKNKDP
NIIKPPVSTLDTVKPSQKGFILSTNNTNTDQQQFVKPLKSIESFTFAKSDLSASEKLIPI
DSKQNSDIITTKTDNFLPKKTGKLRREHTSSHYSVPKTEEIINTLPSIPNVSFSLPSITT
FKSSFQSASVEILPKPFISNESKEIAVKDVFYFSEPSVLAVRNHSEDPKMQCYTFSEPIP
IKKQSQNEVSQPIFINNEKDKVKGDFIFKTFKLPGSWECSVCLVNNKPDSVKCAACQNEK
AKLPIESDNSKAPSVSSSFLQISQIKHLSSKFLKSENSWDCSTCLINNKSNSDKCVACET
LKSKSVANEHSAAENTKVTIINENFKAPTSNSQVPQTNPLSLKFLKSESSWDCSTCLINN
KSSSEKCVACETPNPKSIASVDKFKSDMQNTRTNSSLPNSFPSSSIFTFGKSNHSDTQSN
IKIPYFLSTTSKSVFANVSENAALSNNVFTFAKSLPESSIFTFGKPSNSTAQNDSKISFF
KTETNADNIVKVSESTSNFITHAKSLPESSIFTFGKPNCSTVSNDVPVLLSSTNVAGSLL
KDSENKIFSGNVPLFAKSLPESSIFTFGKPIISTQNSNLDPSLSMTSNKTDSFAKVSESA
NISSNVKSLPETLAKSFPETSIFTFGKPNNSFSQNSFPSFSSTTNSNATLNSVPTLAFNA
ANNQSKSGESSQSITTPLFSFGKISEKPATSFQWGKTSANPIDAKSSENTVCETNLFSKK
LQSESSSIASGVSTNIYQPSFFSQPSVFGTTSSVTNAPTFNFVKTTEEPLSLNSVLVSKP
SSTLFGSTPIVFGSSVSTNLNNAGFCFGNSASSSFSTIPSINFLTGSKPSFLSENSEPSF
LPKAVPTKPFDFSSSNVPSFNFTSAQMPSFNFTSTDNAQNSDISKNLFLNGTSGLFSFGA
APSSNDRRHKQRHRTLPK
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggtttttgggtgtcatctgccgccatttcgcatgcaaaatggtgtcgtaaggtccaaa
aacgtgattttaaaaaatgttttaataattaaaaaagtaaaaagcgaaatgtataataat
aatgttgtgttaaatgataaatctcgaaaaataaagtctcattcctcaaaaagtcataga
gcaaatccatatacgaaaaatcgaaatgttcatttggagaaaaagtctgatgttgagcag
ggtatattaggacgggtttcaaattacattgttccaaattggatatcatcttggtggaaa
aaagacaaaaatgaagaaaacagtggtttttcagaaaatgatgaaagtgatgaaagtgac
gaaaataatgctcaaagcagccaacctcaaatcattaaatcaaatgaaaatcataaaatc
aagtcattatcctatgaaggtactcaaaatagcaactcaatcgtacaatccactgctgtg
aagcctccatcattagggttctatgataaagttggtaattctgataatactttaaatcat
ccttcatttttagataatagctttgattctgtacagttttatccaagcaagcagtcgttt
tcaaacgatgaaaaggttattgaagtatcacattcaaactcagttaaacagaaatcgcct
tttgttctaaagcctgcttttaatgtttcagcttttatttctcctaacctcagcgcacaa
aattttaatactacaatgaacacaacattggatttgtcagctgtgaacaagtcactgttt
tatagcggacaaacaaagtttggtggttcttctacatacagacaagattcaattaagaga
caaagaatatctcctgtttctaaccaagcatgtaccacacttactcaaatgaaagctaaa
tcacttccatatgcaaagaggaatgcagttacaagtgcaacagctaaaaaaatacttagt
actttagacaatatgtcttcaccagttaaagattcacgaaagttgccttctatgcaacat
cttatatctcctttaacatttagtcaaaaattgcgcgatttatctaaaaacaaagatccc
aatattataaaacctcctgtaagcaccttggatactgtcaaaccgtctcaaaaaggattc
attttatctaccaacaatacaaatactgatcagcaacagtttgtaaagccattaaaatct
atagagagttttacttttgctaaatcagatttatctgcttcagaaaaattaataccaatt
gattctaagcaaaattctgacatcatcacaaccaaaacagataattttttacctaaaaaa
actggtaaattaagaagagagcatactagtagtcattattctgttcccaaaactgaagaa
attataaacactctaccgagtatacctaatgtatcattttctttgccctctataactacg
ttcaaatcatcatttcagtctgcctctgtagaaattttgcctaaaccttttatttcaaat
gaaagtaaagaaatagctgtcaaagatgtgttttatttttctgaaccaagtgttttagct
gttagaaatcatagtgaagacccaaaaatgcaatgttatacatttagtgaacccatacct
attaaaaagcaatcacaaaatgaagtttctcaacctatttttataaataatgaaaaagat
aaagtcaaaggagattttatatttaagacatttaaattaccaggttcatgggaatgtagt
gtttgccttgttaataataaaccagactctgttaaatgtgcagcttgtcaaaatgaaaag
gcaaagttaccaatagaaagtgataattctaaagctccttcagtttctagcagttttcta
cagatttctcaaataaagcatttatcttcaaagtttttaaaatcagaaaattcatgggat
tgttccacttgcttaataaataacaaatccaattccgataaatgtgttgcttgtgaaact
cttaagtcaaaaagtgttgctaatgaacattctgctgctgaaaatactaaggtaacaatt
ataaacgaaaattttaaagctcccaccagtaattcacaggttccccaaacaaacccttta
tctttaaagtttttaaaatcagaaagttcatgggactgttctacatgcttgataaacaac
aaatctagttcagaaaaatgtgttgcatgtgaaactcctaatccaaaatcaattgcatca
gttgataaatttaaatcagatatgcaaaatacaagaactaactcgtcacttcctaattcc
tttcctagttcaagtatttttacatttggcaagtccaatcattctgatactcaaagcaat
attaaaattccctattttttatcaactacaagcaaaagtgtttttgcaaatgtttctgaa
aatgcagctttatctaacaatgtttttacatttgctaaatccttacctgaatcaagtatt
ttcacatttggtaaacctagtaattcaaccgctcaaaatgatagtaaaatttcatttttc
aaaactgagactaatgctgataatattgtaaaagtttctgaaagtactagcaattttatc
actcatgctaaatctttgccagaatcaagtatttttacatttggaaaacctaattgttct
acagtttcaaatgatgttccagttttattatcatcaacaaatgtagcaggcagcctcctc
aaagattctgaaaataaaattttttccggaaatgttccattatttgctaaatcgctccct
gaatcaagtattttcacatttggaaaacccattatttctactcaaaatagtaacctagat
ccatctttatcaatgacttcaaacaaaactgatagtttcgcaaaggtttctgaaagtgca
aacatttctagcaatgttaaatcactacccgaaactcttgctaaatcatttcctgaaaca
agtatttttacatttgggaaaccgaataattctttttctcaaaacagttttccatccttt
tcatctacgacgaattccaacgccactctaaattcggtaccaacattggcatttaacgca
gcaaataatcaaagtaaatcaggcgagtcttcacaatctattactacaccgcttttttcg
tttggtaaaataagcgaaaaaccagcgacttcctttcaatggggtaagacttcagcaaac
cctattgatgcaaagtcttctgaaaatactgtatgtgaaactaatttattttccaaaaaa
ttacaatccgaatctagttctattgcttcaggagtttcaacgaatatatatcagccatct
ttttttagtcaaccttcggtatttggtactacaagctccgttactaatgctccgacgttt
aattttgtaaaaaccactgaagagccgttgtcattaaactctgttttggtttctaagcct
agttcgacgttgtttgggtccacacctattgtttttggatcttctgtaagtactaatcta
aacaatgccgggttttgcttcggtaattcagcatcatcaagtttttctactatcccttct
attaatttcttaacaggttctaagccatcttttttaagtgaaaattctgaaccttcgttt
ttgccaaaagcagtaccaactaaaccatttgacttcagttcttcgaacgtaccctccttt
aactttacttccgcacagatgccttcgtttaattttaccagtactgataatgcacaaaac
tctgatatttcaaaaaatttgtttttaaacggaacaagtggactattttcatttggtgcc
gcaccttcatcaaatgataggcgtcataaacagcgtcatcggacgctgccaaaataa
DBGET
integrated database retrieval system
