Hydra vulgaris (swiftwater hydra): 100201689
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Entry
100201689 CDS
T01080
Name
(RefSeq) putative autophagy-related protein 11 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hmg04121
]
100201689
Enzymes [BR:
hmg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100201689
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
U-box type E3
100201689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-CCHC
U-box
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
100201689
NCBI-ProteinID:
XP_047137813
UniProt:
A0A8B7DE85
LinkDB
All DBs
Position
8:complement(51630610..51682117)
Genome browser
AA seq
1425 aa
AA seq
DB search
MSSIHYKFRSNLEYNTITFDSQAVSLNDLRDAIMLQKKIAKSPDYTLEITNAQTKEVYND
DDALIPKNSSVIVKRVPIQRLAAVTDKSLSKEEEELTEMAFAQLSKTADLAGARASEDDK
ILAMMSQSGLDFDPSTYLKRAPPNYVCFRCGGKGHFIRNCPTQGDARYNKMQITRQPSGI
PREYYLMKMKQEEDLIASLRAMQDENSRFSPVVGSDIVDHSKVPSELQCPMCKKLFTDVV
VTPCCGESYCDECIRTYLVENDIICKCGETTSPDNLIANKSLRISVNNFRNQKKELKSVP
SSVAVSQPVISHVMLPNSTESVVDFSTTESSGIFTNGNEAPNIQVTEATVMNSPKKFQSE
QQPIVGPNVVSHVEMPQMIASIPQHILSGSQALFPSVPGAIYSQSGYVLPQTRMLPGVVG
LSIPPGATIIKRLVPVPVGPRIGIPTQTVLPPQFVTHQPLNHLNQGMMARISLAQKSKEL
LKEPESPMPLTEDEFYMWQSKIKKHDPRSRHRHRSSSRDRYRSRSRSPYYRNHSVSPVGS
SQEYKKKSKTKRRRRESSQESGGESSSVKHKSRSEKRLPKTDLKRFVPDHIKRELDEFEF
DNEVEFDEEMLSLKKKKGKVKNNEHSVKNTKDSSPTSVLKSFSEGDSNLTKASDDFNVES
AENKTLTSSVVNKAAQENLRIPVVGETIAPKRKTRIVKKKIIRVIKKKVPRKKVPLCPDS
SEQLTNLLEVNDSISNEVLGKDVSINGEPLPKVELDKIVLVSEDKNKNLDEVISIAEQTA
KPGVLVDKKIDDKNAQSFNICKDDKLLHINIDSSEMPENSRWQIEETISNKKLKLSTSPT
NKTSVISVVSSRKPSQKFAESDVAQKRKFSQSDNKNIKKRVVLLKSTQSKAEEVAAEVLA
KKEAEKLALAQQVKKACASFRKEQSLTSDIEEDGLRRKRERREKYLLVKEKRLAKERQYL
EQLKAAKKDPQKEKKAHISGESSSDDDGKIEKRPDQEFYKPGEKLKSISEMSKKRLQQED
QMKSNTRMDQNESDVLKSKISSLTVITAKKINDRASDDETIISNETKDSRRVVCIESNKR
LLSSEVALPSEAKLKSCLQGDSIRPLRDEPLTEKRLKQDTDREKRRHIRCETRNDVSDYQ
RSLKTDQTRREKSKNERNDMSRVQELERERRLAVLEKEQLERKLKKERKLREIMEREKLQ
AELVNKASSLNAENKSKNISVENFENNSEAEDSTDSEIEKKSNKKKSKKIKERKRKRKRE
MQENSESEDSEESSVYSSEDDRKKRRKKRKHKSKHKKHRKSKKHKKKTKKKKFRKDSTDK
EESNDESNNAEKAVVEKASSDEELSSSTDINQKHSDSDSEKSSSSSGCESKKTTSPLINS
NAISSEKSSSSSCEKISSPLITSNCLDSKSSLESIKDRITPISSL
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaatacattacaagtttcgtagcaatttggagtataacacgattacatttgat
agtcaagccgtatctttaaatgacttaagagacgcaataatgttacagaaaaaaattgct
aagtctcctgattataccctggaaattacaaatgcgcaaacaaaagaagtctacaatgat
gatgatgctttgattcccaaaaattcttctgttattgtaaaacgtgttcctattcaaaga
cttgctgctgtaacggataaatctttatcaaaggaggaagaagaactcactgaaatggct
tttgctcaattaagcaagacagctgatctagctggagcacgagcatcagaagatgataaa
atattagctatgatgagtcaatctggcttggattttgacccatctacatatttaaaacgt
gcaccaccaaattatgtgtgttttcgatgtggtggaaaaggtcattttataagaaactgt
ccaactcaaggagatgcaagatacaataagatgcaaataactcgccagccttcagggatt
cccagggaatactatcttatgaaaatgaagcaagaggaagatcttatagctagcctacgt
gcaatgcaagatgaaaatagtcgtttctctcctgttgtagggagtgatattgttgaccat
tcaaaagtcccatcagagttgcagtgtccaatgtgcaagaaactattcactgatgtagtt
gtcactccttgttgtggggaaagttattgtgatgaatgcattcgtacttacttggttgaa
aatgacatcatctgtaaatgcggtgaaacaacttctccagataatctgatcgctaacaaa
tcactaagaatatctgtaaataactttcggaatcaaaagaaagaactaaaaagtgtacca
agttcagtagcagttagtcaacctgttattagtcatgttatgttgccgaattctacagaa
tcagtagttgacttttcaactactgaaagttcaggaatatttactaacggtaatgaagct
cccaatattcaagttactgaggcaacagtgatgaattctccaaaaaaatttcaatcagaa
cagcaaccaatagttggtccaaatgttgtaagtcatgttgaaatgccgcaaatgattgca
tctattcctcaacatattttatctggttcacaggcactctttccttctgttccaggagct
atttattctcaatctgggtatgtcttgcctcaaacacgaatgctaccaggtgttgttggg
ttaagtattccaccaggtgctactattattaagcgacttgtaccagtaccagttggtcca
agaataggaattccgactcaaaccgttttgccacctcagtttgttacacaccagccacta
aaccatcttaaccaaggaatgatggctcgtatttcacttgctcagaaatctaaagagttg
ttaaaagagcctgaatcgccaatgcctttaacagaagatgaattttatatgtggcaaagc
aaaattaaaaaacatgatcctcgttctagacatcggcaccgtagttcttctcgtgatcgt
tacagaagtcgcagtcgtagtccttactacagaaatcatagtgtttcaccagtcggttct
agccaagagtataagaagaaaagtaaaacaaaaagacgccgtcgtgaatcttcccaagaa
agtggtggcgaatctagtagtgtaaagcataaatcacgctctgaaaaaagacttccaaaa
actgatttaaaaagatttgttccagatcacataaaacgtgagctagatgaatttgaattt
gataatgaagtagaatttgatgaagaaatgcttagtttaaagaaaaaaaaaggtaaggta
aaaaataatgaacattcagttaaaaatactaaagattcctcaccaacttcagttttgaaa
tctttttctgaaggggatagtaatcttactaaagcatcagatgattttaatgttgaatct
gctgaaaataagacattaacaagtagtgttgtaaataaggcagcgcaagaaaatttaaga
attccagttgttggcgaaactattgcaccaaagcgaaaaacaagaatagttaaaaagaaa
attattcgtgtcattaaaaaaaaagttcctaggaaaaaagttcctttatgtcctgatagc
tctgagcaacttacaaatttattagaagtaaatgattcaattagtaatgaagttttaggg
aaagatgtttctatcaatggagaaccactaccaaaagtagaacttgataaaattgtactt
gtgtcagaggataaaaataaaaatttggatgaagtgatcagcatagcagaacaaacagct
aaacctggtgttttagtagataaaaaaatagatgacaaaaacgctcagagtttcaacatc
tgtaaagatgataagctattacatataaatattgacagttcagaaatgccagaaaatagt
cgatggcaaattgaagaaacaattagtaataaaaaattaaaactttctacttctcctaca
aataaaacatcagtgatttctgtagtatcaagcagaaaaccaagtcaaaagtttgctgaa
agtgatgttgctcaaaaaagaaaattttctcagagtgataataaaaatattaaaaaaaga
gtagtattgttaaaaagtacccaatcaaaagctgaagaggttgcagcagaagttctcgct
aaaaaagaagcagaaaaactagctttagcccaacaagtaaaaaaggcatgtgcctctttt
cgtaaagagcaatccttgactagtgacatagaggaggatggactaaggcgaaaacgtgag
cgtcgtgagaaatatcttcttgttaaagaaaaaaggttagctaaagaacgtcaatattta
gaacaacttaaagcagctaagaaagatccgcaaaaggaaaaaaaagcacatatttcaggt
gaaagtagtagtgatgatgatggaaaaattgaaaaacgtccggatcaagaattttacaaa
cctggagagaaattaaaaagtattagtgaaatgtcaaaaaaacgtttacagcaagaagac
caaatgaagtcaaatactagaatggatcaaaatgaaagtgatgtgttaaagtcaaaaata
tcaagtttgaccgttatcactgctaaaaaaataaatgacagagcttctgatgatgaaaca
ataatcagcaatgaaactaaagattctcgcagggttgtttgtatagaaagcaacaaacgg
ctgttatcttctgaggttgctctgcctagtgaagcaaaattaaagagttgtttgcagggt
gattctattcgtccattacgggatgaaccattaactgaaaaaagacttaaacaagataca
gatagagagaaacgtcgacatatacgttgtgagactcgcaatgatgtcagtgactatcaa
agaagtttaaagactgatcaaactcggcgtgaaaaatctaaaaatgaaagaaatgatatg
tcgcgtgttcaggaattagaaagagaaaggcggttagcagtacttgagaaagaacaactt
gaaagaaagttaaaaaaagaacgcaaactcagagaaatcatggaaagagaaaaattacaa
gctgaattagtgaataaggcaagttctttgaatgcagaaaacaaaagcaaaaatatatct
gttgaaaactttgaaaataattctgaagcagaagattccactgacagtgaaatagaaaaa
aaatctaataaaaaaaaatcaaagaagataaaagaaagaaaacgaaaacgaaagcgagaa
atgcaagaaaactctgaatcagaagacagtgaagaatctagtgtttatagcagtgaagat
gatcgtaagaagagaaggaaaaaaagaaaacacaagagtaaacataaaaaacacagaaag
agtaaaaagcataagaagaaaaccaagaaaaagaaattcagaaaagattcaactgataag
gaagaaagtaacgatgaatcaaacaatgctgaaaaagcagttgttgagaaagcgtcttca
gacgaagaattatcttcatcgactgatatcaatcaaaaacattcagattcagatagtgaa
aaatcaagttcatcttctggctgtgaaagtaaaaaaacaacctctcctttaattaattca
aatgctatttctagtgaaaaatctagttcatctagctgtgaaaaaatatcttctccttta
attacttcaaattgtttggattcaaaatcaagtttggaatcgataaaagaccgtattacg
ccaatatcttcattatga
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