Hydra vulgaris (swiftwater hydra): 100201905
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Entry
100201905 CDS
T01080
Name
(RefSeq) dynactin subunit 1
KO
K04648
dynactin 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100201905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
100201905
03036 Chromosome and associated proteins [BR:
hmg03036
]
100201905
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hmg04812
]
100201905
Membrane trafficking [BR:
hmg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
100201905
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
100201905
Cytoskeleton proteins [BR:
hmg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
100201905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
100201905
NCBI-ProteinID:
XP_047126265
LinkDB
All DBs
Position
1:complement(662489..708627)
Genome browser
AA seq
1356 aa
AA seq
DB search
MAETPAPGFNARVGMRVEVIGKDQIGTICYVGMTAFAAGKWVGVALDEPNGKNDGSVQGK
KYFDCSPNHGIFVRQTQLAEINDQLQTTTSGTMLPSLQTTTSGTMLPSFSSGILSPRKIG
MTPLKSQPAPQSGLVTPKISSSAETVSTSSSIQNVLEASNEIPVATPVATSEKIKSGLAK
PKLGKISNLEELTPPKESNLPGKPKLIPGLNTQRPSNTQSESSIQVDPNIQSNNQRSSFI
SKRGSNLGSQPTEIPETTNESLNVDLMQKSVEPTLQASRVPSEEFLELQRKLIEKEKANL
DLEEKLNVLKQKRIADQNKIKEIDKIKMQNQQLLEYKAKWQESTRELQMQIKALRNEAND
ADNLKGQNELNELQEAVEMATLDKEMAEEKYESLLQEHEHLKEKHEEVTLELEILKNEIS
EGGVGTVAANAELKQMEQQNIRLKEALIKLKDIAQNDKSELSNSQKENKSLNQKLSAIAS
ERDTLQEKLRHMESQVDELKEQVDFALGAEEMVEKLTDKNLELEEKIEQYEETIKDLEAL
RELNTELEEGHIMTEQDLREELELADKKIDEYEKQLAAHVEQISDYQSTILKFRELVQNL
QNCIKELQSNGSSSQQVDLDSTPVPDIDFKTKIKQYKRIIELELNKYHVKEANKQIQMVH
AFLPDHFTKRGGDFDGICLLLLLERLRFKCELLSAQLHEKHDIQDIIEEGQLLNDSKGDQ
ASHACLLAYNLAQFYVIVSQFMRALYCCDVGTFMRASAQYPELAVHEKMLDNYIELLSKD
LLDDTVSIEVFEKTINQYMNIYKLHLGNALRDCTEFLADSLVRFNIGSECVSIDIQRLKG
ISKNCKEGSSFVNLIHFIELKNMELKQFCRKIRRRMVQDSSTTLSYPDQVVEELLTAQEE
QGILVKYMQDLASVLSLKASQLFENEFLLPERLMEAAEDCVTLFFKSDDDPMDVLSKSFH
KILSCLSGIALKLPEGDYDTEPEKKRTPPYLERAAIFKDELSSSMKLENIIEQKDQEILH
IKRNLKIKSDDLSEANIRISLLEKRADNAAKEADIKVEQMAKKLEATEIACREKTKQSEK
TMDALQSDIDALENERSEMRKKLEILSKKTSIDMSRTSSLQMLSPAKAGSTIATLAKAGV
AGASPSVQVVLKDSPVFLAQMEGQKKALEYLQTEYWSLKCEKMKNDLASLPKPYIPNIVW
KDGKFVKNSSDSSKKTSQSVLKECNGLYQNLRNLSAFPKVVDITKGFTKDGLYRPSPEEQ
LFQQKDLLFKLSKQKDELSKKVQEVITEELVGGVVHSYLRDFVSPQYSRLNQEKISPVHV
ATLRFPVTNNEVKPGVHNVTVTAQEFMRIHEVLIHS
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggctgagacacctgcacctggattcaatgctcgtgttggcatgcgtgttgaagtcata
ggaaaagatcaaatcggtacaatttgctatgtgggcatgaccgcatttgctgctggcaag
tgggttggtgttgctttagatgaaccaaatggcaaaaatgatggctcagtgcaaggaaaa
aagtattttgactgttctccaaatcatggtatatttgttcgacaaacacaacttgcagaa
attaatgatcaattacagacaactacctcaggaactatgttaccatcattacagacaact
acctcaggaactatgttaccatcattttcaagtggaatattaagccctcggaaaattggg
atgacacccttaaagagccaacctgctccacaatcaggtctagtgacacctaaaatttct
tcatcagcagaaacagtgtctacatcctcttcaattcaaaatgtgttagaagcatctaat
gaaatacctgtggcaacgcctgtggcaacttcagagaaaataaaatcagggcttgcaaaa
cccaagttaggcaaaatatcaaacttggaggaattaactccacctaaagaaagtaattta
cctggaaaaccaaagttaataccagggttaaatacacaacgcccatctaatactcagtca
gaatctagcattcaggttgatcccaacattcaatctaataatcagcgttctagttttatt
tcaaaacgtggatcaaatcttggatcccaaccaacagaaataccggagacaactaatgag
agtttgaatgttgatttaatgcaaaagagcgtagaacctactcttcaagcatctcgtgtt
ccatcagaagaatttttagaacttcagagaaagttgattgaaaaagaaaaagcaaattta
gacttggaagagaagttgaatgttctgaaacaaaaaagaattgcagatcaaaacaaaatt
aaagaaattgacaagattaagatgcagaatcagcagcttttagaatacaaagcaaagtgg
caagaatctacaagagagctccaaatgcaaattaaagccttacgaaatgaggctaatgat
gcagataatctaaaagggcaaaatgagcttaatgaactacaggaggctgttgaaatggct
acacttgataaggaaatggcagaagaaaaatatgaaagtttgctacaagaacatgagcat
ttaaaagaaaaacatgaagaagtaactttagaattggaaatactcaaaaacgagatcagt
gaaggaggtgtagggactgttgctgcaaatgctgaacttaagcaaatggagcaacagaac
attcgactgaaagaagctttaatcaagttgaaggatattgctcaaaatgataagtccgag
ctttccaattctcaaaaagaaaataaatcattaaaccaaaaattatctgcaattgcaagt
gagagagacacactacaagaaaagttgagacatatggaatctcaagttgacgaattaaag
gagcaggtggactttgcacttggagcagaagaaatggttgaaaaattgacagataagaat
cttgaactagaggagaaaatagagcagtatgaagaaaccatcaaagatctggaagctctt
cgtgaattaaatacagaattggaagaaggacacatcatgacagaacaagatttaagagaa
gagttagagttagcagacaaaaaaatagatgagtatgagaagcaactagctgcccatgtt
gagcagataagtgattatcagtcaaccattttaaagttcagagagctcgtacagaatttg
cagaattgtattaaagaactccaatcaaatggatcttcttctcaacaagttgatcttgac
tctacacctgtaccagatattgattttaagacaaaaataaagcaatacaaaaggattatt
gagctagagttgaacaagtatcatgtgaaagaagcaaacaaacaaatacagatggttcat
gcttttcttccagatcattttacaaaaagaggaggtgattttgatggcatttgtttattg
ctgctactagaaaggttgagatttaaatgtgaacttttatctgctcaattacatgaaaaa
catgatattcaagatatcatagaagaaggacaattattaaatgattcaaaaggtgatcaa
gcaagtcatgcttgtcttttagcttacaatctggctcagttttatgttatagtatctcag
tttatgagagcattatattgttgtgatgttggtacatttatgcgtgcttctgctcagtat
cctgagttagctgtccacgaaaaaatgcttgataactatattgagttattgagtaaagat
ttgttagatgatactgtttctatagaagtgtttgagaaaaccattaatcaatatatgaac
atttataaattacatttgggaaatgcacttcgtgattgtacagaatttttagctgattca
ttagttagatttaacattggctctgaatgtgtatcaattgatatacagcgtttaaaaggg
atatctaagaactgtaaagaaggaagctcttttgtaaatctcattcattttattgaactc
aaaaatatggaattaaaacagttttgtagaaagatcaggcgtagaatggtgcaggattca
agtacaacattatcatatccagatcaagttgtcgaagaattactaacagcacaagaagaa
cagggaatattggttaaatacatgcaagatttagcgtctgttctgtctttaaaagcgtct
caactttttgaaaatgagtttttattgcctgaacgtttgatggaagcagcagaagattgt
gttacacttttttttaaatctgacgatgatccaatggatgtgttaagtaagagtttccat
aaaatcttatcatgtttatcagggattgctttaaaattaccagaaggagattatgatact
gaacctgaaaagaagcgaacacctccttaccttgagagagcagctatatttaaagatgag
ctatcttcgtctatgaaattagaaaacattattgaacagaaagatcaagaaatattacat
attaaaaggaacttaaaaattaagagtgatgacttaagtgaagcaaacataagaataagt
ttacttgaaaaaagagctgataatgctgctaaagaagctgatattaaagtagaacagatg
gctaagaagctagaggcaactgaaattgcttgccgtgagaaaacaaagcaaagtgaaaag
acaatggatgcattacaaagtgacattgatgctctagaaaatgaaagaagtgaaatgagg
aaaaagttggaaatattaagtaaaaagacgagtattgatatgtctcgaacatccagcttg
caaatgctgtcacctgcaaaagctggatcaacaattgcaacattagcaaaagcaggtgta
gctggggcttcaccttcagtacaagttgttcttaaagattcgcctgtctttctagctcaa
atggaggggcaaaagaaagctttggaatacctacaaacagaatattggtcgctgaagtgt
gaaaagatgaaaaatgatttggcttctttaccgaaaccttatatcccaaatattgtgtgg
aaagatggcaaatttgttaagaattcatctgacagttctaaaaaaacatctcaaagtgtt
cttaaagaatgcaatgggttgtaccaaaatcttcgaaatttgtctgcatttccaaaggtt
gttgatataacaaaaggttttacaaaagatggattataccggccatctccagaagagcaa
ctgtttcaacagaaagatttactttttaaacttagtaaacaaaaggatgagctttcaaag
aaagttcaggaagtcattaccgaagagcttgtgggcggagtagttcatagctatctgaga
gattttgtttcaccccaatactctaggctcaaccaggagaagatttctccagtacatgtt
gcgacccttcgatttccagttactaataatgaagtaaagcctggagttcataacgtcacg
gtgacagctcaagaatttatgcgcattcatgaagtacttatccacagttaa
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integrated database retrieval system
