Hydra vulgaris (swiftwater hydra): 100201922
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Entry
100201922 CDS
T01080
Name
(RefSeq) polycystic kidney disease 2-like 1 protein isoform X2
KO
K04986
polycystin 2
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hmg03037
]
100201922
04040 Ion channels [BR:
hmg04040
]
100201922
Cilium and associated proteins [BR:
hmg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100201922
Ion channels [BR:
hmg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100201922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
PEP-utilisers_N
Motif
Other DBs
NCBI-GeneID:
100201922
NCBI-ProteinID:
XP_012560632
UniProt:
A0A8B7DR13
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All DBs
Position
2:complement(23211843..23258957)
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AA seq
826 aa
AA seq
DB search
MSAKKRQRTFNFSQVSIRKDHESDDSKFLSSSHQKLSWQDDVDHIYSDPINQEINLSPYD
AQSYKDFEAKATVHPNDCCNVFLKGFRGIWKTQYTDDIKDREIILKSLLRELAIYLIFII
ILSIISFGMTSSIMFYFTKSLKDLFTGPSPPSILTFENVASMDDFFNYCDKVLIEGLYWE
KYYNEEVVPENQRGYIFFENKLLGLPRLRQVRVRNDSCLVHKFFRNYVSKCFASYSPESE
SKDDFGLENDIIWKYKSESTLEGRVFSGQISTYGGGGYVSLLANNKNESSQILSNLKHNL
WLDRGTRAVFIDFTVYNANINLFCVITLVFEFPPTGGCVTSALYRPLKLLRYVTNMDYFV
MGCEVIFVIFILYYLIEELLEIKKHKLAYFFDVWSIFDVLVLCIGIFCIVFNIYRTIIVN
KLLEDLLVNQEQYANFDFLSDWQCRFNDFVAVGVFIAWIKIFKYIKFNKTMSQLQSTLAR
CAKDIAVFAVMFMIVFLAYAQLGNLLFGSKLNDYNTIIDCIYTLFRIILGDFTFSDLKNT
NPILGPIYFVTFVFFVFFVLFNMFLAIINDSYAEVKSELANQEDEFQMVDYFKKGYNKLI
NKLSIKKVRIVDIQEALKSSDKKQDNLSFDEWRSELKLRGYADAEIEAVFAKYDMDRDFV
LNSEERGKMMIDLEQQKKKINNEIEEVSKAKHQVIQSQLMLNDMDIHSDTENMIDEDNDN
SEYSLRSESAQSSNKKLVTYNEYTILARRVDRIEHSVGTILSKVDRLLLKLEAMDKLKVK
RRETMVQLLNIIENQNNNGSNADQVSLENTQSQSPTTSIKNGSINI
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaaaaaaaagacaaagaacctttaacttttcgcaagtatctattagaaaagat
catgaaagtgatgattcgaaattcttatcgtcgtcacatcaaaaattgagttggcaggat
gatgtggatcacatttactctgacccaataaatcaagaaataaacttgagcccatacgat
gctcaatcatataaagattttgaagctaaagctacagtacacccaaacgattgctgtaat
gtattcctaaaaggattcagaggaatatggaaaacacaatatacagatgatattaaagac
cgagaaataattcttaaatcgttattgagagagctggcaatttatttaatctttatcatt
attttgagtataatatcgtttggtatgaccagctcaattatgttttactttaccaaatct
ctaaaagatctatttactggtcctagtcctccatcaatcttaacatttgaaaatgtagca
tcaatggatgattttttcaactattgtgataaagttctgattgaagggctttactgggag
aaatattataatgaagaagtagtaccagaaaaccagagaggttatatattttttgaaaac
aagttgttaggtctaccaagattgcgtcaagttcgagttagaaatgactcctgtttagtt
cataagttcttcagaaattatgtttcaaaatgttttgcttcttattcgccggagagtgaa
tctaaagatgattttggtttggaaaatgatattatttggaaatataaatctgaatcaact
cttgaaggtagagttttttctggacaaatatcaacatatggaggtggtgggtatgtttca
ctgttagcaaacaataaaaacgaatcatcacaaattttatctaatcttaagcataatctt
tggcttgatcgaggcacaagagctgtttttattgattttacagtttacaatgccaatatc
aacttattttgcgttatcactttagtgtttgagtttccaccaacagggggttgcgtgacg
tctgctctttatagaccattgaagttactgcgctatgttacaaatatggattactttgta
atgggttgtgaagtgatatttgtgatatttattctatattatttaattgaagaattgctt
gaaattaagaagcataagttggcgtatttttttgatgtgtggagcatttttgatgtcctt
gttctttgcattggaatattttgcattgtgtttaatatttaccgcacaataatagtgaac
aaattgttagaggatttgttagtaaatcaagaacaatatgctaactttgattttttaagt
gattggcagtgtcgatttaatgattttgttgcagttggagtttttattgcatggataaag
atcttcaaatacattaagttcaacaagacgatgtcgcagttgcagtcaactttagctcgt
tgtgccaaagacatagcagtgtttgcagttatgtttatgatagttttcttagcatatgct
caactagggaacctcctatttggttccaagttgaatgattataatacaattattgattgc
atatatacgttgtttcgcatcattcttggagattttaccttttctgatcttaaaaataca
aatccgatactaggcccaatatactttgttacctttgtgttctttgtattctttgtttta
ttcaatatgtttttagcaatcatcaatgattcttatgcagaagtaaaatcagaactagca
aatcaagaagatgagtttcagatggttgattactttaaaaaagggtacaataaactgata
aataagttatccataaaaaaagtgagaatcgttgacattcaggaagcgctcaaaagttct
gataagaaacaagataatttgagttttgatgaatggagatcagaacttaagttacgtggt
tatgccgatgcagaaatagaagctgtttttgctaaatatgatatggatagggattttgta
cttaattcagaagagcgtggaaaaatgatgattgaccttgaacaacaaaagaaaaaaata
aacaacgagatagaagaagtgtcaaaagctaaacatcaagtcattcagagtcagttgatg
ttaaatgatatggatatacattctgatactgaaaatatgattgacgaagacaatgacaac
agcgaatattctttgagaagtgaaagtgcccaatcaagtaacaaaaagcttgttacatac
aacgagtacactattttggcacgtcgtgttgatcgtattgagcatagtgttggtactatt
ctttcgaaagttgatcgcttgttactaaagctagaagctatggataaacttaaggttaag
cgacgagaaacaatggttcaacttttgaatattattgagaatcaaaataataatggttct
aacgcggatcaagtatcattagagaacactcagtctcaatcaccaacaacttcaataaag
aatggaagtataaacatttag
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