Hydra vulgaris (swiftwater hydra): 100201951
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Entry
100201951 CDS
T01080
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100201951
03036 Chromosome and associated proteins [BR:
hmg03036
]
100201951
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100201951
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100201951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
S1
Tex_YqgF
HHH_9
SH2
HHH_3
S1_RRP5
Tex_N
DRMBL
Motif
Other DBs
NCBI-GeneID:
100201951
NCBI-ProteinID:
XP_047142239
LinkDB
All DBs
Position
10:24635083..24729756
Genome browser
AA seq
1715 aa
AA seq
DB search
MSDFLDSEAEESDEDFEDIQPNERKDDSDDEDEDEDAGIDENEINDIINDEPEEEQDENS
DEDEDLLSSRKRKHESDEDDVDEDDLDLIQENTGIKIRKKKHSRVKLLDSDDEEADRPPQ
NERDKIAHDIFDADDNDEVSVLSDRPESRHSHSSYKAVEVGDEESGDEVDDFIVDDEDQP
IRAKKSKKKSVSGRYTDSALQDAQDIFGLEFDLSELEPESDDLGEGEFDEDLDEEELAAK
IEQRKARKKASRKSIYDIYDPTELERSHLTLEDNRIKITDVPERFQLRAIPVQQVSNTEL
EEEAEWIYKQAFMQPPISQQNFQDPVDATKQYVGFEPKGVTAIPRIRAALGFMKKDLFEV
PFIAMYRKEYVEPELKKEDLWKVYEWDEKYTQFSLRKNNLKRLFKDMQAYQFDISKKNSD
EPLKDDFRLLEQEDIDRLENAQSLEELMDIYLHFQLYYGDDVPNMHEWKKQKKPQKKTKK
KVVRVKKVKTNKIQEVDPETGETATDSENVTLSGEVKNVGKSSEDLDNEEDNEEEYEEKE
IDVTDSEASENDLAVKKENVDRKLPRKRTLYTICKDNGLLKMASNFGLTAAQFGENLRDN
YQRHEPIQFSQTPLEAAESLICNTFPSAEAVLTGARHMVAMQISRDTLVKQNVRQMFIEN
AKIYITPTKKGKKEIDNNHPNAPFKYLKSKPLRDLHGEQFLKMWHAEQENLVKMRIMIGQ
EQHNQGFSYLDEIKQLYHRDEFSLLVQEWNKQRSEALSLALSKMLYPMLEKELKAKLLRE
SIDFAIQACTRKLHNWISVAPYQPDSNQEGEYSTDNESSYGSRVLSCSFLPDRNAVSFFA
MLDADGQVVDFLRLKYLLCRKNSVKKSEQDAKISDMNKLKDFIRKYSPRVVAVAAECCEA
QRVLDDITEAVQELEQDHQMPHIYVELVPGEVARIYQNSPRGLMEFPEYPELLRHAISLG
RRIQNPLVEFAGLCNFEEELTCLRLHPMQDVLPTDLLQRRLEIEFINEVNLTGVDINRAL
DFPHMAVLTQFLCGLGPRKAGHLLKTLRQQGLRLENRSQLVTVCEMGLQVFLNCAGFIRI
EPSEANDKYEVLDGTRIHPETYDWPRKMAIDALEYDDGMEESNPSSAVEEILEQPDRLKD
LDLDAFAEELARQGYGNKQITLYDIRDELINRFKDHRPTFKGLSIEERFQLLTGETQQSL
YYGKMITCVVTGFACKKPTREQLDSANPTRNDETNLWRCPFCLRDNFFELSEVWTHFDNG
SCPGQSIGVRTRLENGINGFISTKNISDKGCKRPEERVKVGMTLHARVIKINYERIQVDL
TCKTSDLTDAHGNFSPPRDMYYDQEAADKDKKAEELLKIALTKRTTYVKRVIAHPSFKNV
TFKDAEKLLETMDQGECIVRPSSKGTDHLTVTWKVDNGIYQHIDVREEGKENAFSIGRSL
WIDNEEYEDLDEVMAHHISPMATHARELLNHKYYKETGGVRAKLEEILTQEKRKTPGRIP
YFFASNKQYPGKFMLGYMPRLKPKIEFVTVTRDGFRYRGRIHANTNNLLKWFKEHFRDPI
PGVGTPLRRTPHNQTPMSIIGSTPYTPGATPSNLISEDEAAKLLQQAFPAGFDHQMYNSL
TMTPARSTPGFSTPGSFSIGNLTPLLDNRPTEVEGSFAQWANQGQNYGGNSNNKFKRDRG
GKVGFQGRGGYQGNRSFDRNRSDNQRNDGQRRHRR
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttctggatagtgaagctgaagaatctgatgaagattttgaagatattcaa
cctaatgagcgcaaggatgattcagatgatgaagatgaagacgaagatgcaggaatagat
gaaaatgaaattaatgacattattaacgatgaaccagaagaagagcaagatgaaaatagt
gatgaagatgaagatttattaagtagtcgtaaaagaaaacatgagagcgatgaagatgat
gtcgatgaagatgatcttgatctaattcaagaaaatactggaattaaaattagaaaaaaa
aagcactcacgtgttaaattattggattctgatgatgaggaagctgataggcctccacaa
aatgaacgagataaaatagctcatgatatatttgatgcagatgacaatgatgaagtatct
gttttgtccgatcgaccagaatcaagacattcacacagtagctataaagcagtagaagtt
ggagatgaagaatcaggagatgaagttgatgattttattgttgatgatgaggaccaacca
ataagagctaagaaatcaaaaaagaaaagtgtatctgggagatacactgacagtgcatta
caagatgcccaagatatctttggattggagtttgatttgagtgaattagaacctgaatct
gatgatttaggtgagggagagtttgatgaggatttagatgaagaagaattagcagctaaa
atagaacaacgtaaagcaaggaaaaaagcttctcgtaaaagtatttatgatatatatgac
ccaactgaactggagcgtagtcatttaacacttgaagataatcgtattaagatcactgat
gttcctgaaagattccaacttcgagccattcctgttcaacaagtttctaatacagagtta
gaagaagaagcagaatggatttataagcaagcatttatgcagccacctatatcacagcaa
aattttcaggatccagttgatgcaacgaagcagtatgttggttttgaaccaaaaggtgta
acagcaattccgaggatacgtgcagcacttggttttatgaaaaaagatttgtttgaggtt
ccatttattgctatgtacagaaaagaatatgttgaaccagaactgaaaaaggaggactta
tggaaagtttatgaatgggatgaaaagtatacacagttttctctacgaaaaaataatttg
aaacgtctttttaaagatatgcaagcatatcagtttgatattagtaaaaaaaattctgat
gaaccattaaaagatgattttcgacttttggaacaagaggatattgaccggttggaaaat
gcccaaagtttagaagaattaatggatatatatttgcacttccaactgtattatggtgat
gatgttccaaacatgcatgaatggaaaaagcaaaagaaaccacagaaaaaaacaaaaaag
aaagttgtacgtgttaaaaaggtaaaaacaaataaaatccaagaagttgaccctgagaca
ggtgaaactgcaactgattcagaaaacgttactttatctggagaagtgaaaaatgtagga
aaatctagcgaagacttagataatgaagaggataatgaagaggaatacgaagaaaaagag
atagatgtaactgattctgaagcaagtgaaaatgatcttgcggtcaaaaaagaaaatgta
gatagaaagcttccaagaaaacgaactttgtacaccatatgtaaagataatggattgtta
aaaatggcatcaaattttggtctgactgctgcacagtttggtgaaaatttaagggataat
taccagagacatgagcctatacaattttcacagacaccacttgaggctgcagaatcacta
atatgcaatacatttccgtctgctgaagcagttctaacaggagctcgtcatatggtggct
atgcaaatttctcgtgacacacttgtgaaacaaaatgtcagacaaatgtttattgaaaat
gcaaagatttatataacacctactaagaaaggaaaaaaagaaatagataataatcaccca
aatgctccatttaagtacttaaaaagcaaacctttacgagatcttcatggagagcagttt
ttaaaaatgtggcatgctgagcaggaaaatcttgtcaaaatgagaattatgattggtcaa
gagcaacacaatcaaggattttcataccttgatgaaataaagcaattatatcatcgggat
gaatttagtctactggtgcaagagtggaataaacagcgctctgaagccttatctttagct
cttagtaaaatgttgtatcctatgttagaaaaagaactaaaggccaagttacttcgtgaa
tcaatagactttgctatacaggcttgtactagaaaattgcacaattggatatctgttgca
ccataccagcctgatagtaaccaagaaggagaatactccacagataacgagtcatcatat
ggatctcgtgttttatcatgttcatttttacctgataggaatgctgtttctttctttgca
atgctagatgcagatggacaagttgttgattttcttcgattaaaatatcttttatgtagg
aaaaacagtgtcaaaaaatctgaacaagatgcaaagataagtgatatgaacaagttaaag
gattttatacgcaaatattctccacgagttgttgctgtagcagcagagtgttgtgaagct
caacgagtattagatgacatcactgaagctgtccaggaattagagcaagatcatcagatg
ccacatatttatgtagagttagttcctggagaagttgcaagaatttatcaaaattcccct
agaggattgatggaattcccagaatatcctgagctgcttagacatgctatatcattaggt
cgtcgcattcaaaatccgcttgttgaattcgctggactctgtaattttgaagaagagcta
acatgtctaagacttcaccccatgcaggatgtgttaccaactgatttactacagaggcga
ttagagattgagtttatcaatgaagtgaatctaactggtgtggatattaacagggcctta
gattttccacacatggctgttttgacccagtttttgtgtggtttaggtcctcgtaaagct
ggtcatttacttaagacattaaggcagcaaggattacgcttagaaaatcgttctcaattg
gtaacagtatgtgagatgggattgcaagtatttcttaactgtgctgggtttataagaatt
gagccttcagaagcaaatgataaatatgaagttcttgatggcactcgaatacatccagaa
acttatgactggccaagaaagatggctattgatgcacttgaatatgatgatggcatggaa
gaatctaatccatcttctgctgtagaagaaattttagagcaaccagataggctcaaagat
ttagacttggatgcttttgctgaggagttagcaaggcaaggttatggaaacaaacaaatt
acattgtatgacattagagatgaactaataaacagatttaaagatcatcggccaactttt
aaaggcttatctattgaagaacggttccaactactaactggtgaaacacagcaatctttg
tattatggtaaaatgattacttgtgtagttacaggttttgcatgtaaaaaacctactaga
gaacagttagactctgctaaccctactagaaatgatgaaacaaatttatggagatgtcct
ttctgtttacgagacaatttttttgaactgagtgaggtttggacacactttgataatgga
agctgtccaggtcaatctattggagtccgaactcgattagaaaatgggataaatggcttc
attagtacaaagaacattagtgacaagggttgtaaaagaccagaggaaagagtaaaggtt
ggcatgacccttcatgctagagtaataaaaattaattatgagcgcatacaagttgatctt
acctgcaagacatcagatctaacagatgctcatggaaattttagtccaccgcgtgacatg
tattatgatcaggaagcagcagataaagacaaaaaagctgaagaacttttaaaaattgct
ttaactaaaagaaccacttatgtgaagcgtgttattgctcatccatcatttaagaatgtc
acttttaaagatgctgaaaaacttcttgaaacaatggatcagggagagtgcattgttcga
ccttcaagcaaggggacagatcatttaacagtaacatggaaagtagacaatggaatttat
caacatatcgatgttcgggaggagggtaaagaaaatgcatttagtattggcagatcatta
tggattgacaatgaagagtatgaagatcttgatgaagtcatggctcatcatatttctccg
atggccacacacgctagagaattgttaaaccataaatattacaaagaaactggaggtgta
agagcaaaacttgaagagattcttacacaagaaaaaagaaaaactcctggacgcatacct
tatttttttgctagcaacaaacagtatcctggaaaatttatgttaggttatatgccacgt
ttaaagcctaaaattgagtttgttacggtaacacgagatggttttcgttaccgtggaaga
atacatgcaaatactaataatctgctaaaatggtttaaggagcactttcgagatccaatt
ccaggagttggtactccactacgtcgaactcctcacaaccaaacgccgatgtcaataatt
ggcagcactccatacactcccggtgctacaccttccaatcttatttctgaagacgaagct
gctaaacttctacaacaggcgtttccagccggctttgatcatcaaatgtataattcgctt
actatgactccagcccgatcaacaccaggtttttctacacctgggagcttttcgataggg
aatttaactccattattagataatcgtccaactgaagtggaaggtagttttgcccaatgg
gctaaccaaggacaaaattatgggggtaattctaataataagtttaaaagagatcgtggt
ggaaaggttggttttcaaggaaggggcggatatcaaggtaatcgttcattcgatcgtaat
agaagtgacaatcagcgaaatgacggccaaagaagacatcgtagataa
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integrated database retrieval system
