Hydra vulgaris (swiftwater hydra): 100202102
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Entry
100202102 CDS
T01080
Name
(RefSeq) RNA exonuclease 1-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100202102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmg03009
]
100202102
Ribosome biogenesis [BR:
hmg03009
]
Eukaryotic type
Pre-60S particles
RNases
100202102
BRITE hierarchy
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GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
100202102
NCBI-ProteinID:
XP_047143384
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All DBs
Position
11:29152321..29184966
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AA seq
570 aa
AA seq
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MDFSVNISNDNGCVKKLNKRKRKKKGNKKEISKMDLDDTNSILKDEDITINMESEQNGNN
YFIEVRGKKKKKEHPPSIIFDIDELFSLGGKRAMNTSLNISDIRTLLLSATDPNFTVLPN
WCQLKARNRIKRSLFIMVSGVSEDDFKNNMDCFPFLTKNFEKHVPVRNDGSDNMIKSPLE
SYLMYTISKKILLKQSIKKTNDYEDTELDFHDYILSDFQLKVNDYPEWNSAALEHGIIST
RKNNEVMRAHKNSKLLAIDCEMCSVMGDKRALTRVSIVDDKLNLVYDQLVQPDSPITDYL
TQFSGITPAMLHGVTTTLQDVQRDLLKIIQPDTILIGHSLDFDLRSLMLHHDNIIDTSVL
YVDNRGPRYKSSLRCLVKSYLNRDIQNTDKGHCSIEDARACMELVKLKIKKGPSFGNPLI
DKESIFDGLTRAGKRGVILDLIHIVRQYANGNNHGIACTSDDQVASNGKKIVNTVDFTFC
NFRSYEQLLKSEVVVTEKEQKETLRKIDEHISEVVLVAEPSSIVVIALSNGFIPSKTMRL
LRDKEQRNCDEVKNAVKKAKQGACFLKITR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggatttttctgtgaatatatcaaatgacaatggttgtgtgaaaaagttaaataaaaga
aaaagaaagaaaaagggaaataagaaagaaatttcaaaaatggacctagatgacaccaat
tcaatattgaaagatgaagatataactattaacatggaatcagaacaaaatggcaataat
tattttattgaagtcagggggaaaaagaaaaaaaaagagcatcctccatccatcatattt
gatattgatgaacttttttctttgggaggaaaacgagcaatgaacacttcattaaatata
agtgatattcgtactctcttattatctgcaactgacccgaactttacagtgcttcccaat
tggtgtcagcttaaagcaagaaatagaattaaacgctctctttttataatggttagcggc
gtttcagaagatgatttcaaaaataatatggattgttttccattcttaacaaaaaatttt
gaaaaacatgttcctgttcgaaatgatggctctgataacatgatcaaatctccattagag
agctacttaatgtatactatttcaaaaaagatacttctaaaacagtctattaaaaaaact
aatgactatgaagatactgaacttgattttcatgattacattttaagtgattttcaattg
aaagtcaatgattaccctgaatggaactcagctgctcttgagcatggcattatttctact
cgaaaaaacaatgaagtaatgcgtgcacacaaaaatagtaaattattagcaatagattgt
gaaatgtgcagtgttatgggagataaacgtgctttaacacgagtgtctattgtagatgat
aaattgaatcttgtttatgatcaacttgttcaaccagattcccctattacagactatctt
acacagttcagtgggataactcctgcaatgttacacggagtaacaaccacacttcaagat
gtacaaagagatttacttaaaattatccaaccagatacaatattaattggtcattcactc
gattttgatttgcgttctttgatgcttcatcatgacaatatcattgatacatctgtactg
tatgttgataatcgtgggccaagatataaatcatctctccgttgccttgtaaaaagttac
ttaaatcgagatattcaaaacacagataaaggacattgctcaattgaagatgcaagagcc
tgtatggagctagtgaaattaaaaataaaaaaaggaccatcatttggaaatccacttatt
gataaagaaagtatatttgatggtttaactcgagctggaaaaagaggtgtgatattagat
ttaatccacattgttcgtcaatatgctaatggaaataatcatggaatcgcatgcacctca
gatgaccaggttgcgtcaaatgggaagaaaattgtaaatactgttgattttactttttgc
aatttcagaagttatgaacaacttttaaaatcagaagttgttgtcactgaaaaggaacaa
aaggaaactttgcgaaagatagatgaacatatttctgaagtagttttagttgctgaaccc
agttccattgttgtaattgcattgagtaatggtttcattccatctaaaacaatgagattg
cttcgagacaaagagcagcgaaattgtgatgaggtaaagaatgcagtgaaaaaagcaaaa
caaggagcatgttttttgaaaatcacgcgatag
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