KEGG   Hydra vulgaris (swiftwater hydra): 100202489
Entry
100202489         CDS       T01080                                 
Name
(RefSeq) coatomer subunit alpha-like
  KO
K05236  coatomer subunit alpha
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hmg04131]
    100202489
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hmg04147]
    100202489
Membrane trafficking [BR:hmg04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    100202489
Exosome [BR:hmg04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100202489
  Exosomal proteins of bladder cancer cells
   100202489
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_SCAP WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_Nup120_160 eIF2A zf-RING_4 zf-Tbcl_FmdE
Other DBs
NCBI-GeneID: 100202489
NCBI-ProteinID: XP_047126355
LinkDB
Position
2:complement(52559241..52589734)
AA seq 1221 aa
MLTKFETKSARVKGLAFHSKRPWVLASLHNGVIQLWDYRMCTLLDRFDEHDGPVRGIDFH
ENQPLFVSGGDDYKIKVWNYKQKKCIFTLLGHLDYIRTTFFHHEYPWIVSCSDDQTIRIW
NWQSRNCINVLTGHNHYVMCAQFHKTEDYIVSASLDQTVRVWDISGLRKKFASPGTKDRD
DTSVKNPGQIDLFGHADAVVKHVLEGHDRGVNWVTFHPTMPLIVSAADDRQVKLWRMNES
KAWEVDTCRGHYNNVSSVIFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRENDRYWIL
AAHPTLNLFAAGHDSGMVVFKLERERPAYTVHQNTLYYVKDRYLRIYEFGSSIDKPIMQF
KKGAGRPNPVHLVYNPAEQCILLTYGTSSSVDSQVYELHALPKDIKSSDPEVSEGKKAAG
ISAVWVARNRFAVLDKQQNVVIKNLKNEVTKKVTTPACDMIFYAGTGSLLLRDAEQIMFF
DVQQKRVMASIKIAKCRYVVWSSDMNFVALIAKHTISICNRKMENLSSVHESVKIKGGAW
DDSGVFVYTTSNHIKYTLTNGDSGIIRTLDLPIYITRVKGSSVYCLDRDCKTKVLNIDPT
EFKFKLALVNHRYDEVLNMVRNAKLVGQSIISYLQKKGYPEVALHFVKDQKTRFGLALEC
GNLEVALEAAKSLEDKLCWEKLSEMALKQGNHQVVEMCYQRTKNFDRLSFLYLTTGNTDK
LRKMLKISEIRKDVSGHLHNALYCGDIRERIKVLKQVGQGSLAYLTAATHGLTEECAEIQ
TLFNLDPEKLPAINPNAKLLRPPVPILLNEGNWPLLAVSKTIFEGSTPLKDAPMSVSAVQ
GDFGEEGEGWGDSDLVLEEDAGFADPDEKLKVDEEGSGWDVGDDDLELPKDLDIAPVSGG
EDFYVPPTKGNSQGQVWLSNSQLPMDHLAAGSFDSAARLLNEQLGVVNFEPYKQLFMLAY
ARGRVAVPGLPSCPSLYFYPHRNWKEAGAKAGLPAIGLKLNNLVQRLQVAYQLTTGGKFT
EAAERLHQILLSVTLLVVESRQEITEAQQLLGICREYLVGLQMETVRKDLPKDTSDQQKR
VCEMAAYFTHCSLQPIHLVLTLRTALNLAFKIKNYKTAASFARRLLELGPKPEVAQQTRK
ILQACEKSPTNAVVLDYDELNPFSICAVTYTPIYRGKPEEKCPLCQASYKPQYKGTICKI
CEVAEVGRPSSGLKISLSQFR
NT seq 3666 nt   +upstreamnt  +downstreamnt
atgttgactaaatttgaaactaaatctgctcgagtaaaaggtcttgcatttcattctaaa
cgaccatgggttttagcaagtttacacaatggtgtgatacaactctgggattatcgaatg
tgtactttattagatcgatttgatgagcatgatggccctgtacgtggaattgactttcat
gaaaatcaaccattatttgtctcaggaggtgatgactacaaaattaaggtttggaattat
aagcagaagaaatgcatatttacattgcttggacatttagattatataagaacaacattc
tttcaccatgagtatccttggattgtaagttgctctgatgatcaaacaatacgtatatgg
aattggcaatcaagaaattgtattaatgttttaactggtcataatcattatgtgatgtgc
gctcaatttcacaaaactgaagattacattgtttctgcttctcttgatcaaacagtacga
gtatgggatatttccggtctgcgaaagaaatttgcttcacctggtacaaaagatcgtgat
gatacttcagtaaagaatcctgggcaaatagatttatttggacatgcagatgctgttgtg
aagcatgtgcttgaaggtcatgaccgcggtgtaaattgggttacgtttcaccctacaatg
ccattaattgtatctgcagctgatgaccgccaagttaaattgtggagaatgaatgaatca
aaggcttgggaagttgatacttgtcgtgggcattacaataatgtttcgtctgtaatattt
catcctagacaggagctaattttaagtaactcagaagataaatcaatacgtgtctgggat
atgtctaagagaactggagttcaaacatttcgcagagaaaatgacagatattggatactt
gctgctcatccaactcttaatttgtttgctgcaggacatgatagtggtatggttgttttt
aaactggagagagaaagaccagcttatactgtccatcaaaatactctttattatgttaag
gatcgttacttacgaatatatgaattcggatcttccattgataagccaataatgcagttt
aaaaaaggtgctggtcgaccaaaccctgttcacttagtatataatccagctgagcaatgc
attcttttgacctatggtacaagttcttcagttgacagtcaagtctatgagttacatgct
cttcctaaagatataaaatcttctgatcctgaagtgtctgaaggaaaaaaagctgctggt
atatcagctgtatgggtagctcgtaatcgttttgccgttctagataaacagcaaaatgtt
gtcattaagaatttaaaaaatgaagtgacaaaaaaagttacaactcctgcttgtgacatg
atattttatgctggtacaggaagtttactactaagggatgctgaacaaataatgttcttt
gatgtacagcaaaagagagttatggcatcaattaaaatagccaagtgcagatatgttgtt
tggtcatctgatatgaattttgttgcactaattgctaaacacacaatttcaatttgtaat
agaaaaatggaaaatttaagctcagttcatgaaagtgtgaaaatcaaaggtggtgcatgg
gatgattcaggtgtatttgtatacacaactagtaatcatattaaatacacattaacaaat
ggtgatagcggcataataagaacattggatttaccaatatacataactagagtgaagggc
agcagcgtttattgtttggatcgtgattgcaagactaaagttttgaatattgatcctaca
gagttcaagttcaaactagcattggtgaatcatcggtatgatgaagtactgaatatggtg
cggaatgcaaaattagtaggacagtccatcatctcttatttgcaaaagaaaggttatcca
gaggtggcacttcactttgttaaagatcaaaaaacaagatttggtttagcattagaatgt
ggtaatcttgaagttgcattagaagctgctaaatctcttgaagacaaactttgttgggaa
aagcttagtgaaatggcattgaaacaaggaaaccatcaggtagtagaaatgtgttatcaa
agaacaaaaaattttgatcgcctttcttttctatatcttacaactggtaatactgataag
ttaagaaaaatgctaaaaatctctgagattcgaaaagatgtaagtggtcacttacacaat
gctttgtactgtggagatattagagaaaggattaaagtgctgaagcaagttggtcaaggt
tcactagcttatctgactgctgcaactcatggactgactgaagaatgtgctgaaatacaa
actttgtttaatctggatccagagaagttgccagcaataaatcctaatgccaaactgttg
cggccacctgtaccaattttactgaatgaaggaaattggccactacttgctgttagcaag
acaatatttgaaggatcaacaccattaaaagatgcgcctatgtcagtttcagcagttcaa
ggtgattttggcgaggaaggagaaggatggggagattcagatttggtcttggaagaagat
gcaggatttgctgatcctgatgaaaaattaaaagttgatgaagaaggtagtggttgggat
gttggagatgacgatcttgaactcccgaaggatctggatattgctccagtatcaggtggt
gaagatttttatgtacctcctactaaaggcaatagccaagggcaagtatggttgtccaat
tctcaattaccaatggatcatttggcagctggttcatttgattcagcagcaaggctacta
aacgaacaattaggagttgtaaattttgaaccttacaaacagttatttatgcttgcatac
gctcgtggtcgtgtggcagtaccaggcctaccttcttgtccaagtttatacttttatcca
cacagaaactggaaggaagctggagcaaaagctgggttacctgctattggcttaaagtta
aataacttagtacaaagattacaggtagcataccaattaacaactgggggaaaatttact
gaagcagcagaaagacttcatcagattcttttgagtgttactttgttagttgtagaatca
aggcaagaaataactgaggcccaacagctattgggtatctgtagggaatatcttgttggt
cttcaaatggagactgttagaaaagatttaccaaaggacacatctgatcagcaaaagaga
gtttgtgagatggcagcttactttacacattgcagtttgcaacctattcatttggtgctt
acccttcgaactgcattaaatcttgcttttaagattaaaaactacaagactgctgcgtcc
tttgcacgtcgtttattagagttaggaccgaaaccagaagttgctcaacagacacgaaaa
attttacaagcttgtgaaaagagtcctactaacgcagtggtattggattacgacgaactt
aatccattttccatttgtgctgttacctatactccaatatataggggtaagcctgaggaa
aagtgtccattgtgtcaagcttcgtataaacctcagtataaaggaactatttgcaaaata
tgcgaggttgctgaagtcggaaggccaagctctggtttaaaaataagtctttcgcagttt
cgctaa

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