Hydra vulgaris (swiftwater hydra): 100202601
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Entry
100202601 CDS
T01080
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmg03009
]
100202601
Enzymes [BR:
hmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100202601
Ribosome biogenesis [BR:
hmg03009
]
Eukaryotic type
90S particles
Helicases
100202601
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-GeneID:
100202601
NCBI-ProteinID:
XP_002168355
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All DBs
Position
5:complement(36860151..36878350)
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AA seq
429 aa
AA seq
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MATKFTDLGLHEWLNKQCLEMGISKPTEIQVSCIPEILSGRDCIGSAKTGSGKTAAFALP
IIQKLSEDPYGIFALILTPTRELAIQIADQFKALGKSIGLNDAVIIGGLDMVKQGMELSN
QPHVVIATPGRLASHITSGTKFSLNKIKFLVLDEADRLLEKSFENDLEVIFDNIAKKRQT
LLFSATITDAINHLKEVAHNPFCYEVKSDFATVTELDQRYLLIPSQVKDCYLVHLLQNFS
EKSVIIFTQTCRSCQVISFMLRKVEFKCAGLHSVMSQRERLSSLGRFRSGHVKILVATDV
ASRGLDIPLVQLVINYNVPASPKDYVHRVGRTARAGRGGMSLTLLTQFDIDRLKAIETFI
GLKMKEFETNEDDAVKLLKPISIIRREVEIRLNDANFGEKKKNNKRKLGLLNSNSKPKLF
NKKKITDVT
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaaatttacagatttaggtcttcatgaatggttaaacaaacaatgtctagaa
atgggcatttccaaaccaactgaaattcaagttagttgcattccagaaattctttcaggg
agagattgcattggatctgcaaaaactggaagcggtaagaccgcagcgtttgctcttcca
atcattcaaaaactttcagaggacccttatgggattttcgctcttatactgactccaact
agggagcttgctattcagatcgcagaccaatttaaagcacttggaaaatcgattggtctc
aacgatgcagttataattggtggtcttgatatggttaaacaaggaatggaactaagcaac
caacctcacgttgtaattgcaactccaggaagattagcttcacatataacgagtggaaca
aagttttcattgaataaaattaaatttttagtccttgacgaagctgatcgattgttagaa
aaaagtttcgaaaatgatcttgaggtgatttttgataacattgccaaaaagagacagact
ttacttttcagtgcaacaatcactgatgcaattaatcatttgaaggaagttgcacataat
ccattttgttatgaggttaaatctgattttgctactgtaacagagctagatcaaagatat
ctacttataccatctcaagtaaaagactgttatttagtgcatttgcttcaaaatttttcc
gaaaaatctgttataatatttactcaaacatgtcgaagttgtcaggttatatcatttatg
ttacgaaaagtagaatttaaatgtgctggacttcattctgtaatgtctcagagagagaga
ctttcatctttaggacgctttcgttccggacacgttaaaatacttgttgctactgacgta
gctagtcgcggattagatattccgcttgttcaacttgtgataaattataacgtacctgct
tcacctaaagactatgttcatagagtaggtcgaactgctcgtgctggaagagggggaatg
tctctaacccttttaactcaattcgatatcgatagactcaaagctattgaaacctttatc
ggtttgaagatgaaagaatttgaaacaaatgaagatgatgctgtcaaacttttgaagcct
atatcaattataagaagagaagtagaaattagattgaatgatgcaaattttggagagaaa
aagaaaaataataaaagaaaattaggtttattaaactcaaacagtaagccgaaattgttc
aataaaaaaaagataactgatgtaacctaa
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