Hydra vulgaris (swiftwater hydra): 100202642
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Entry
100202642 CDS
T01080
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hmg03036
]
100202642
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hmg04812
]
100202642
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
100202642
Microtubules and associated factors
gamma-tubulin ring complex
100202642
Cytoskeleton proteins [BR:
hmg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
100202642
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_RFWD3
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
PAC11
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Tricorn_2nd
WD40_like
MIOS_WD40
GA
Motif
Other DBs
NCBI-GeneID:
100202642
NCBI-ProteinID:
XP_047122734
LinkDB
All DBs
Position
14:complement(8475144..8531759)
Genome browser
AA seq
679 aa
AA seq
DB search
MPELLLATAGEDLRLWAMPTLNLHSVKNGTNANLTSCSCSPNGQLVAYAHEGEGLNVASL
QEDDQDVINIPTSCEQSSVSFNGNSRYLVSSGVDHVVCIWDIKSKTAKRIYKDHTHPVTC
SIFNYNDNTIASSSNHGNILLTNVQSGVSSEPLSTGENQAIRSLNYSHFVRSLLASINDS
GAVSLWDTKEKKLIKTFTEHKGPGTKVSFSPLNDMLLCSCGLDKRIIFYDVTGKKMVKTI
NTEGPVTCCEFMHDGCTVAAGTASGRLYLFDLRQGSTPVKVVTAHKTSVRSVSFQMIPKE
KSPNRIAADNNSLGRVEGMSQKENSLEVTNNTQQPSDGSTSQINNTPTYTTMNNIQNNAS
SLNQRENTSNSMVQRENSTVNLNNMLNLNKVANLKVPQGNTAATPMKAAKLNSDDIFSPI
PIDVNIRKAAVSRQKSTPKVNSFLAETNVTSSEEMRPTYLRSKSSFSKFSSVARSTDDLS
YIQKKGREKDGDKDSIDSGKRGILGFKSPFKKKHVKHSDESETSSIESFDQNGKSPMAGR
RDKNEQKSDRSIDSFTSLKISNASEQLYNVTKIDTNQFASDIQHSLAMQITSPNHPAEVN
DYHSSFQIELIKSMIDDAMEESRTAVHDAIVNLQVEMLRQMEIQKEQIRQMILNHSVNED
LVSEVNRLRAENERLRLKY
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttattgcttgcaacagctggtgaagatttgcgactatgggcaatgccaaca
ttaaacttgcattcagtgaaaaatggaactaatgctaacttaacatcatgttcttgcagt
cctaatggtcagttggtagcctatgcacatgagggagaaggtttaaatgttgcatcttta
caagaggatgatcaagatgttataaatatacctacttcttgtgagcaatctagtgtttct
ttcaatggaaattctcgctatcttgtaagcagtggagtggatcatgttgtatgcatttgg
gatattaaatctaaaacggctaaaagaatttataaggatcacacacatcctgttacttgc
agcatttttaactacaatgataatacaatagcttcttcttctaatcatggcaatattttg
cttactaatgtgcaatcaggagtttcatctgaaccactttcaacaggtgaaaaccaggca
atccgaagtttaaattattcacactttgtaagatcattgttggcatcaattaatgacagt
ggtgccgtatcgttatgggatacaaaagaaaaaaagttaatcaaaacatttacagagcat
aaagggcctggtacaaaagtatcattttcaccactaaatgatatgttgctttgttcttgt
gggttagataaacgaattattttttatgatgttactggaaaaaaaatggttaaaactatt
aacacagaaggacctgttacctgttgtgagtttatgcatgatgggtgtactgttgcagct
ggcacagcttcaggtagattatacttatttgacctacgacaaggatcaacaccagttaaa
gttgttacagcacataaaacatctgtacgctctgtttcatttcaaatgatacctaaggag
aagtctccaaatcgaatagctgctgataacaattctttaggaagagttgaaggcatgagt
caaaaagaaaattccttggaagttacaaataatactcaacagccttcagacggatcaact
tctcaaattaataatacgcctacttacaccactatgaataatattcaaaataatgcaagc
tcattgaatcagagagaaaacacatcaaattcaatggttcagagagaaaatagcacagtg
aatttaaataatatgttaaacttaaataaagtagccaacctgaaagtaccccagggcaat
actgctgcaacacctatgaaagcagcaaaacttaatagtgatgacattttctcacctatt
cctatcgatgttaatattcgtaaagctgcagttagtcgtcaaaaatcaactccaaaagtt
aattcatttttagcagaaactaatgtgacaagtagtgaggaaatgcggcctacctacttg
cgaagtaaatctagtttctcaaaattttcttctgttgcaagaagcactgatgatttgagt
tatatccaaaaaaaaggaagggaaaaagatggcgataaagactcaatagacagtggaaaa
cgtggaattcttggcttcaaatcaccattcaaaaaaaaacatgtcaaacattcagatgaa
tcagaaacaagctccattgagtcatttgaccaaaatggcaaatcaccaatggcaggtcgt
agagataaaaatgagcaaaagagtgatcgttctatcgattcttttacaagtttaaagatt
tcaaatgcttctgaacaactttataatgttactaagattgataccaatcagtttgcatca
gacattcaacattcattggcaatgcagataactagtcctaaccacccagctgaagtgaat
gactatcattcttcctttcaaatagagctaattaaaagcatgattgatgatgcaatggaa
gaaagcagaactgctgtgcatgatgcaatagttaatcttcaagttgagatgcttcgccaa
atggaaatacaaaaggaacaaatacgtcaaatgatactaaatcattcggtaaatgaagat
ctggtctctgaagttaacagattacgagcagaaaacgaaagactacgtttaaagtattaa
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