Hydra vulgaris (swiftwater hydra): 100202752
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Entry
100202752 CDS
T01080
Name
(RefSeq) poly(A) polymerase type 3 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100202752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100202752
Enzymes [BR:
hmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
100202752
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
100202752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
ssDNA-exonuc_C
Motif
Other DBs
NCBI-GeneID:
100202752
NCBI-ProteinID:
XP_047132358
LinkDB
All DBs
Position
5:complement(17810067..17864808)
Genome browser
AA seq
690 aa
AA seq
DB search
MTSSATNTAATATTKQYGITSPINLSGPKEIDEELTKSLEETLKDYGVFETQEQIQHRMV
VLGKLNKLALEWIVKTSIAKNMPESVANSVGGKIFTFGSFRLGVHTKGADIDTLLVAPRH
IERADFFGSFYEFLKNREETKDLRAVEEAFVPVIKMNFDGIEIDLLFARLALTTIPEDLD
LLDENLLKNLDARCVRSLNGCRVTDEILHLVPNIANFRMTLRAIKLWAKNQFVYSNVLGF
LGGVSWAMLVARICQLYPNAIAATLVQKFFLIYSKWAWPQPVLLKQMPTENKLNFPIWDP
RMNPADRFHLMPIITPAYPQQNSTFNVSMSSRTVMQDAFKRGFQVMEEIYSKTSTWKALF
APANFFQKYKHYIVLSAYSNSSEHHLEWEGLVESKIRILIVNLERNQFVKLAHVNPKSYD
PILKSESGTVSRWFIGLEFQKPEGTENVNVDITAEIQYFTSTVHKQACQIAIFREGMRTE
ARHVKKKQLSNYLPNTVLRLKKKSSLNGGSEKQRSSLSECYSEKGESNDAFSQDSMQEAN
DLNMSEKLFVNDPPSSNEEIETLYQNDTPKQQGLKQHGVKRPSSPICLDESPLKRIREQM
NDTAKDLNDTSKQQGLDKHGVKRPSSPISLDASPIKRIREQMDNELVDDGSDIPDTEVLI
PQDELLDTNQLQPIQVNNVKKGAIKLRLNK
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttcagctacaaatacggcagcgacagcgacaacaaaacaatatggaataact
tcacctataaatttgtcaggtcctaaagaaattgatgaagaactcacaaaatctctggaa
gaaacattgaaagattatggggtctttgagacacaagagcaaatccaacacaggatggtt
gttttgggaaaactgaacaaactagctttagaatggattgttaaaacgtcaatcgctaag
aatatgccagagtctgttgcaaattctgttggaggcaaaatttttacatttggatcattt
cgtcttggagttcacaccaaaggtgctgatattgatactttgcttgttgcaccaaggcat
attgaacgagcagatttctttggttcattttatgaatttttaaaaaacagagaagaaaca
aaggatttgcgggctgtagaagaagcatttgttccagtcattaaaatgaactttgatggt
attgagattgacttgttatttgcacgacttgctcttactacgattccagaagatttggat
ttattagatgaaaatcttctcaaaaatttagatgctcgttgtgttcgcagtttaaatggt
tgcagagtcactgatgaaattcttcatttagttcctaatattgccaatttcagaatgaca
ctgagagctattaaactttgggctaaaaatcaatttgtttattcaaatgttcttggattt
cttggtggtgtgtcttgggccatgcttgtagctcgaatatgtcagctttatccaaatgct
attgctgcaactcttgtgcaaaagttttttctgatttattcaaaatgggcatggcctcaa
ccagtccttcttaaacaaatgccaactgaaaacaaacttaattttcctatttgggatcca
agaatgaatccagctgatcgatttcaccttatgccaattattactccagcatatccacaa
caaaattctacatttaatgtgtcaatgtctagtcgtactgtaatgcaagatgcatttaag
cgaggttttcaagtaatggaagagatttattctaaaacctcaacttggaaagcgttattt
gcaccagctaattttttccaaaaatataaacattacattgttttgagtgcttattccaac
agcagtgagcatcatctagaatgggaaggtttggttgaatcaaaaattcgtatacttatt
gttaatcttgaaagaaatcaatttgtaaaacttgctcatgtgaatcctaaatcgtatgat
cctattcttaaatctgaaagtggcactgtatctcgttggtttattggtctagaatttcaa
aaaccagaaggcactgaaaatgtaaatgtggatatcacagctgaaatacaatactttacc
agcactgtacataaacaagcttgtcaaattgcaatatttcgagaaggaatgcgaacagag
gccagacatgtaaaaaaaaagcaattaagtaattatcttccaaacacagtattaagattg
aaaaaaaaaagctctttgaatggggggagcgaaaaacaaagaagttctttatcggaatgt
tattcagagaaaggtgaatcaaatgatgcattcagccaagattctatgcaggaagctaat
gacctaaatatgtcagaaaagttatttgtaaacgatcctccatcaagtaatgaagaaatc
gaaacactttatcaaaacgatacaccaaaacaacaaggacttaaacaacatggagtaaag
cgaccaagttcgccaatatgcttagatgaaagtcctttaaaaagaataagagaacaaatg
aatgatacagcaaaggacttgaatgatacatcaaaacagcaaggacttgataaacatgga
gtaaagcgaccaagttcgccaataagtctagatgcaagtcctataaaaagaataagagaa
caaatggataatgaattagttgatgatggaagtgatattccggatacagaagtattgatt
ccacaagatgaattattagacactaaccaattacaaccaatccaagtgaacaatgttaaa
aaaggagcaattaaacttagacttaataagtga
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