Hydra vulgaris (swiftwater hydra): 100202843
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Entry
100202843 CDS
T01080
Symbol
LOC100202843
Name
(RefSeq) protein bicaudal D
KO
K18739
protein bicaudal D
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100202843 (LOC100202843)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100202843 (LOC100202843)
04131 Membrane trafficking [BR:
hmg04131
]
100202843 (LOC100202843)
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
100202843 (LOC100202843)
Membrane trafficking [BR:
hmg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
100202843 (LOC100202843)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BicD
CALCOCO1
DUF2586_C
Motif
Other DBs
NCBI-GeneID:
100202843
NCBI-ProteinID:
XP_002157132
UniProt:
T2M8Z9
LinkDB
All DBs
Position
07:complement(9000872..9014420)
Genome browser
AA seq
694 aa
AA seq
DB search
MSYEDLKQEVSRLALELQKACLEKVQAAEYGLAVLQEKEVLQNQYDDIKLQYDQVKEQLN
LMSLKNEKLTNCTEQGQGNLLHEISTRESLLVKEISDLKYELKCCKKSDRANRHELEIHK
EEFTQLHEELIKTKEKTEQLIHENKEYKTKEIKFNEDYNMLEEENTSLQKSISKLKQTLI
EFEGMKVENKSLLDEIDSLQLQLQMCTIAKEQFEKQLHEALDTVREQRERNAQHLKEIHD
LKQNSILKMWEIGRGEVFSSFEQEHPIVTKITEEYNTHHVVPSANLVDDLMKELQSSEIR
ELEEQLRQAQKEKHGLELQLTTKSNVAELEKNTSEKFDQNEYYTNNQLKELLDLKEGLKQ
YQSRELVYQLEIKQLSDQLEELKELLIEVENEKNTLAINSKDESKQFSNDLLDARSKLRE
SETKIKSMQEDMKRLKELTGEYQTCLHCAQAELITISQDLVNVLKKANYTGEIVTFEINN
EHLKVGDPGVIVKLLNHVKQQEKALEIVCNNLINSNSGINPSLVSDQALENGYLKEQLLK
CQSLLVAKREQISTLRTVLKANKATYEVALANLKSRYESDKAIQNDVSNQLKRQIKALKS
ECQTFVSLRSMFATRCDEYIKQLEIKDQNIAAAENEKQTLNILLKQAIHQKICLTQRLEE
YEIARERIRQFTKSNLNKNVNKKPVSPTKPITRV
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatgaagacttaaagcaagaagtcagtcgcttggcactggagcttcaaaaggcc
tgtcttgagaaggtccaagctgctgaatacggcttagctgtacttcaagaaaaagaagtt
ttgcaaaatcaatatgatgacataaaacttcagtatgatcaagtaaaagagcaattaaac
cttatgagtttaaagaatgaaaagctaaccaactgtacagagcaaggtcaagggaattta
ttgcatgagatttcaacaagagaatctcttttagtaaaagaaatatctgatttaaaatat
gagttaaaatgctgtaagaaatctgatcgtgcgaatcgtcatgagttggaaatccacaaa
gaggaatttacacaacttcatgaagaattgattaaaacaaaagaaaaaactgaacaactt
attcatgaaaacaaagaatataaaacaaaggaaataaagttcaatgaagattacaacatg
cttgaggaggaaaacacttcacttcaaaaaagtatttctaaactgaaacaaactttaatc
gaatttgaagggatgaaagtagaaaacaagagcctattggatgagatcgatagtttacaa
cttcagttgcaaatgtgtactattgcaaaagagcaatttgaaaaacaactgcatgaagct
ttggatactgtgcgtgaacagcgtgagcgaaatgcgcagcacttaaaagaaatacatgat
ttgaaacaaaactccattttgaaaatgtgggaaatagggagaggagaggtcttttcatca
tttgagcaagagcatccgattgtaacaaaaattactgaagaatataacacacatcatgta
gttccttcagcaaatcttgtggacgatttaatgaaagaacttcagtcaagtgaaatacga
gagcttgaagaacaactgcgtcaagctcaaaaagaaaaacacggcttagaattacaattg
actacaaaaagtaatgtagcagagctagaaaagaatacttcagaaaaatttgatcaaaat
gaatattacactaataaccagttaaaagaattattggatttgaaggagggtctgaagcag
tatcagagtcgtgagcttgtataccaactggaaataaaacaactatcggaccaattggaa
gaactgaaagaacttctaatagaggttgagaatgaaaaaaatacactcgcaattaacagc
aaagatgaaagtaaacagttttcaaatgacttattggatgcaagatcaaagctgcgagag
tctgaaacaaagatcaaaagtatgcaagaagatatgaaacgtcttaaagaactaacaggt
gagtatcaaacatgtttacactgtgcacaagcagagctaataaccattagtcaagatttg
gtaaatgtattgaaaaaagccaattatactggtgaaatagtcacttttgaaatcaataac
gaacatcttaaagtaggggatcctggagtaattgtgaagctactgaatcatgttaagcaa
caagaaaaagcgttggaaattgtttgcaataacctaataaatagtaattctgggattaat
ccatctttagtgagtgatcaagctcttgaaaatggttacttaaaagaacaattattaaaa
tgtcaatcattactagtcgctaagcgagaacaaataagtaccttgcgtacagtattaaaa
gccaacaaagccacttatgaagttgcattggctaatttaaaaagtcggtacgagagtgat
aaagctatacaaaatgatgttagtaatcagttaaaacgtcaaattaaggctcttaagtca
gaatgccaaacttttgtttccttacgaagtatgtttgctactcggtgcgatgaatacatt
aagcagctagaaataaaagaccaaaacattgctgcagcagaaaatgaaaaacaaacgctt
aatatactattaaaacaagcgattcatcaaaaaatttgcttgacgcaacgtcttgaagag
tacgaaattgcgcgcgaacgcattcgacagtttactaagtcgaatttaaacaaaaatgta
aataaaaaacctgtttcaccaactaaaccgataaccagagtttag
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