Hydra vulgaris (swiftwater hydra): 100202852
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Entry
100202852 CDS
T01080
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmg03009
]
100202852
04121 Ubiquitin system [BR:
hmg04121
]
100202852
Ribosome biogenesis [BR:
hmg03009
]
Eukaryotic type
90S particles
Other 90S particles
100202852
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100202852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_IFT122_1st
eIF2A
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
WD_LRWD1
PROPPIN
Motif
Other DBs
NCBI-GeneID:
100202852
NCBI-ProteinID:
XP_047144543
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All DBs
Position
12:complement(39757109..39820421)
Genome browser
AA seq
442 aa
AA seq
DB search
MKVKVLSRNPEDYIRGTTSEINRLPRNLDPDLHPFEAAREYTRALNAAKLERVFAKPFLA
SLDGHSDGVNCLARNPVKVSSVASGACDGQIKFWHLQTRSCLKTVTAHSGFVRGITFSPS
GQKLFSVGDDKTIKQWDVDHNEMIEPLSTYLHSKMMTGIHHHGKNATFATCGEAVEIWDE
NRSIPVQTYSWGVDTVHSVKFNPIETHLVAATASDRSIMLYDTRGTSALRKVIMKMRSNT
IAWNPMEAFIFSAANEDSNAYTFDIRKLDSPVNVHIDHVGAVLDIDYSPTGQEFVTGSFD
KTIRIFPRDRARSREVYHTSRMQRVFCVTFSGDATYVLSGSDETNIRLWKSHASEKLGPT
NPRQRRDLKYSSKLKNQYQHHPEVKRILKHRHVPKLIHKEAKEKRIMLDSIKRKEENMRL
HSKPGSMPVIPERKKHIVTVKK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaagtactatctcgaaaccctgaagattatatacgtggaacaacatctgaa
atcaatcgtttaccacgaaatttagacccagatttacatccttttgaagctgctcgagaa
tatactagggcattaaatgctgctaaacttgaaagagtttttgctaaaccatttttagcc
tcattagatggacatagtgatggggttaactgcttagcacgcaacccagttaaagtctct
tctgttgcatctggggcctgtgatggtcaaataaaattttggcatctgcaaacaagatca
tgtcttaaaactgttacagcacacagtggttttgttagaggtataacatttagtccttct
ggtcaaaaattattttctgttggtgatgataaaacaatcaaacaatgggatgttgaccat
aatgaaatgatagaaccattatcaacatatcttcactcaaaaatgatgacaggaatacat
catcatggtaaaaatgctacatttgcaacatgtggagaggcagttgaaatctgggatgaa
aatagatctatacctgttcaaacatattcttggggagttgatacagttcacagtgtaaaa
tttaatcctattgagactcaccttgtagctgctacagcatcagatcgtagcattatgtta
tatgataccagagggactagtgcattgcgtaaagttataatgaaaatgaggagtaatacc
attgcttggaatccaatggaggcatttatattttctgctgcaaatgaagattccaatgct
tacacttttgacatccgaaaattagattccccagtaaatgttcacattgatcatgttggg
gctgtgttagatatagattactcaccaactggtcaagaatttgtgacaggtagtttcgat
aaaacaataaggatatttccaagagatagagcaagaagcagagaagtgtatcatacatct
cgtatgcagcgtgttttctgtgtcactttcagtggagatgctacatatgtactatctggc
agtgatgagactaatataaggctatggaagagtcatgcttcagaaaaacttggtcctaca
aacccacgtcagcgtcgtgatttaaaatacagtagtaaattaaagaatcaataccaacat
catcctgaagtgaagagaattctgaaacatcgacatgttcccaaactaattcacaaagaa
gctaaagaaaagagaattatgctagactcaattaaacgaaaggaagaaaacatgcgcctt
cacagtaaaccaggctcaatgccagttataccggaaagaaagaaacatattgttaccgta
aaaaaataa
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