Hydra vulgaris (swiftwater hydra): 100203126
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Entry
100203126 CDS
T01080
Name
(RefSeq) retinoblastoma-binding protein 5 homolog
KO
K14961
COMPASS component SWD1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hmg03036
]
100203126
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
100203126
COMPASS/SET1 complex (yeast)
100203126
MLL-HCF complex
100203126
MLL3/MLL4 complex
100203126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
Beta-prop_RIG_1st
Beta-prop_SCAP
Beta-prop_Vps41
Frtz
eIF2A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
100203126
NCBI-ProteinID:
XP_047131743
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Position
4:complement(65172291..65211316)
Genome browser
AA seq
517 aa
AA seq
DB search
MTDLSLLQTFGQSFPEEFDGSLDSISAALTCSFNRTGSLLAVGCNDGRLVIWDFLTRGIA
KVLVAHVHPVSSVSWSRNGKKILTSSTDWNVGLWDVLSGDCEVRYRFPSAVQKVQFHPRD
NNKFLVCPIKHPPVLIEVDGKQHILPVGEECEQNIEASFDKRGDYIFTGNAKGKITVIET
NTLQIKTSYRISTATNANTAIKSIEFARRGNSFLVNSQDRVIRVFDRDAVIACKDGQEPE
PTQKLQDLVNRTLWKKCAFSGDGEFIVAGSSRQHALYIWERSIGSLVKILHGTKGELLVN
VVWHPIRPIICSVANGLVSIWSQTHVENWSAFAPDFKELDENIEYEERESEFDLTDEDKE
ELNNLNNEQHEEVEIDVISIDKPVYYSSDDDDDEDSLLYLPVAPDIDEPESDLLPGGEQL
TSMKRSSISDLPETNEPSLKKAKVTDVSINGDIYDYKNVEAERFIEKPKPKAPNSTRSKR
GGKKSSLGKNRKISPLGADIDDEISQDGSEKQAELTA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgactgacctatcactgctacaaacctttggtcagagtttccctgaggagtttgatgga
agtttggattcaataagtgcagcgttaacatgctcttttaatcgaacgggttcattactt
gctgttggatgcaatgatggccgattagttatttgggattttttgactcgtgggatagca
aaggttttggtggcacatgtccatcctgtttcatctgtcagttggagtcgtaatggtaaa
aaaattttaacatcttcaactgattggaatgttgggttatgggatgtcttgtcaggtgat
tgtgaagtgcgctatcgctttccttcggctgttcaaaaagtacaatttcacccacgtgac
aacaataaattcttggtttgcccaataaaacatccacctgtgttaattgaagttgatgga
aagcaacatattctccctgtcggagaagagtgcgagcaaaatattgaagcttcatttgat
aaaagaggagattacatatttactgggaatgcgaaaggaaagataactgttattgaaaca
aatacactacagatcaaaacttcatatagaataagcacagctacaaatgcaaatactgca
ataaaatcaattgaatttgcaagacgaggaaactcgtttttggtaaactcgcaagatcgt
gtaatccgagtatttgatcgagatgctgtcattgcctgtaaagatggacaggaacctgag
cctacacaaaaacttcaagatcttgttaacagaacattgtggaaaaaatgtgctttctct
ggcgatggagagtttattgtagcaggatcatcaagacaacatgctttgtatatatgggaa
agaagtattggcagtttagtgaaaatattacatggaacaaaaggagagttgcttgtaaat
gttgtgtggcatccaatcagaccaataatatgttctgttgcaaatggacttgtttcaata
tggtcacaaactcatgtagaaaattggtctgcatttgctcctgatttcaaagaacttgat
gagaatattgaatacgaggaaagagaaagtgaatttgatctcacagatgaagataaggaa
gaattaaataacttgaataatgaacaacatgaagaagttgagattgatgtcatatcaatt
gacaaacctgtatattacagcagtgatgacgatgatgatgaagacagtttactttattta
cctgttgcaccagatattgatgaacctgaaagtgatttgttgccaggaggtgagcagttg
acatcaatgaaaaggagttcaatttcagacttacctgagacgaatgaaccttctttaaag
aaagccaaggtcacagatgtttctataaatggagatatttatgactacaagaatgttgaa
gcagagagatttattgaaaaacctaaaccaaaagcacctaattcaacgaggagtaagcga
ggcggtaaaaagtcaagtctgggtaaaaatagaaaaatctctcctttgggtgcggatatc
gatgacgaaatttctcaagatggttcagaaaaacaagccgagttaactgcttaa
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