Hydra vulgaris (swiftwater hydra): 100203240
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Entry
100203240 CDS
T01080
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100203240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hmg03041
]
100203240
Spliceosome [BR:
hmg03041
]
Common components
Common spliceosomal components
hnRNP proteins
100203240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
Snu56_snRNP
Motif
Other DBs
NCBI-GeneID:
100203240
NCBI-ProteinID:
XP_002160219
UniProt:
T2MER6
LinkDB
All DBs
Position
9:49531298..49538839
Genome browser
AA seq
393 aa
AA seq
DB search
MSNQGMKRMNNDSGSGGGAKKMRGDSVTLRFLLMSKHAGGIIGKGGQTIKRLRSEYSATV
NVPDSNSSERVLSIAASQENAIKILCECLPLFHEPPYQVSGGGSQNQKNEFEVDFLVHSS
QVGGIIGRSGFKIKELREQTNANVKVFQECLPNSTERVVALGGGEAEIVDALKKILEIMQ
ESPIKGNIALYDPSQEWNGGQDNYSGSPMNNMRSGPLLGRGNNRSGMGRSGGRSGFQGGN
FGQQGGGFGRAVSSSITSNQESTNGGSHGGSFQNDFSGGQEFGGGGFNNSQSFNDFNSQG
SGNGGDSIFGQGDIQTTQVTIPNDLAGAIIGRGGERIRNIRQRSGADIKIQDPGEGKNDR
VITITGTQDQIQYGQFLMQQSVRQYSGKKGGQL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccagggtatgaaaagaatgaataatgacagtggatctggtggaggtgctaaa
aaaatgcgtggagattctgtaacattaagatttcttctaatgagcaagcatgctggtgga
attataggaaagggtggacaaacaataaaacggctgcgctcagagtacagtgccaccgtc
aatgtcccggattcaaactcttcagagcgggttttatcaattgcagcatctcaagaaaat
gctataaaaattttatgtgaatgtttgccactttttcatgagccaccctatcaagtcagt
ggtgggggaagtcagaatcaaaaaaatgagtttgaggttgattttcttgtacattcaagt
caagttggtggaattattggtcgttcgggttttaaaataaaagaacttcgtgagcaaacc
aatgcaaatgtaaaggtctttcaagaatgtcttccaaactctacagagcgtgtagttgca
ttagggggtggtgaagcagaaatagtagatgcactgaaaaaaattctggaaataatgcaa
gagtctcccattaaaggaaatatagcattatatgacccaagtcaagaatggaatggagga
caagataactacagtggttctccaatgaataatatgcggagtggaccattattaggtcgg
ggtaacaatcgctctggaatgggtcgttctggaggaagaagtggttttcaaggtggaaac
tttggtcaacaaggaggtggatttgggagagcggtaagttcatcaatcacatcaaatcaa
gaaagtactaatggaggcagccatggaggaagtttccaaaatgatttttctggtggtcaa
gaatttggcggtggagggtttaataattcacaaagtttcaatgactttaacagtcaaggt
agtggtaacggtggagattctatatttggccaaggtgacatacaaacaactcaagttaca
attccaaatgatttggctggcgctataataggtcgtgggggagaaagaatacgcaacatc
aggcaaagaagcggtgccgatattaaaatacaagaccctggtgaaggtaaaaatgataga
gttataacaataactggaacccaagatcaaatacaatatggacaatttcttatgcagcag
agcgttcgccaatactctggtaagaagggtggtcaactgtag
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