Hydra vulgaris (swiftwater hydra): 100203679
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Entry
100203679 CDS
T01080
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100203679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hmg03041
]
100203679
Spliceosome [BR:
hmg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
100203679
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
GST_C_3
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100203679
NCBI-ProteinID:
XP_047139658
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All DBs
Position
9:23823911..23909039
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AA seq
501 aa
AA seq
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MAKETLKRALVDVVYDSDDDSVEIKPKIEKVDKSRHCPYLDTINRSVLDFDFEKLCSVSL
SHLNVYACLVCGKYFQGRGNNSHAYTHSVHLGHHVYLNLHTLKFYCLPDNYEIIDPSLED
IKYLLQPTFSKEHIRLLDSSTKVSRALNGTVYIPGVVGLNNIKANDYLNVVLQALVFVPP
IRNYFLRVEHYNNIKRPPGDIMFPLVQRFGELTRKIWNPRNFKSHVSPHEMLQAVVLCSN
RRFQFTKQGDPIEFLSWFINALHFTLNGTKKSKSSVIYKAFRGEMKQFYRKLPATDDKEI
ERKLLESEEYKEKESVSPFLYLTLDVPASPLFKDELEQNAIPQVPLINLLQKFNGHQEKE
YKTYNEISVKKFILTKLPKYLILFIKRFNNNTFFVEKNPTVVNFPVKGLDMKEFLLDDKE
VLENNKDTCYDLIANISHDGEPGSGKGTYRVHVHHKGNKEWYELQDLHVKDILPPMITLS
ESYIQIWELQVKPVIKTNPSD
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaaccttaaaacgtgctttagtagatgttgtatatgacagcgatgacgat
tctgtagaaataaaaccaaaaatagaaaaagttgataaaagtcggcattgtccttaccta
gacacaataaataggtcagttttagattttgactttgagaagctttgttctgtatcatta
tcacacctgaatgtttatgcttgccttgtttgtggaaagtatttccaaggtcgtggtaat
aattctcatgcatatacgcacagtgttcatcttggacatcatgtttatttaaacttacat
actctcaagttttactgtctcccagataattatgaaattattgatccatccctagaagat
attaaatatttgttacaacctacatttagtaaagagcacattcgtcttcttgatagctct
accaaagtatctcgtgctcttaatggaacagtgtatattccaggtgttgttggcctaaat
aatatcaaagcaaatgattatttaaatgttgttctacaggctcttgtttttgttccacct
attcgcaactacttcctaagagttgaacattacaataatattaaaagacctcctggtgat
ataatgtttcctttagtgcaaagatttggtgagttaactcgaaaaatatggaatcctaga
aattttaaatctcatgttagtcctcatgaaatgctacaggctgttgtgttgtgtagtaat
agacgttttcagtttacaaagcaaggagatccgattgagtttctttcatggtttataaac
gcattgcattttacattgaatggaacaaaaaaatcaaagagtagtgtgatttacaaagct
tttcgtggtgaaatgaagcaattttatagaaaacttccagctactgatgataaagaaata
gagagaaaacttttagaaagtgaagaatataaagaaaaggaatcagtatcaccattttta
tatttgacattggatgtccctgcatctcctttattcaaggatgaactagaacaaaatgca
atcccccaagttcctctaattaatcttttacaaaagttcaatggacaccaagaaaaagaa
tacaaaacatataatgaaatatctgtaaagaagtttatactcaccaagcttcctaaatat
ttgatcctttttattaagagattcaataacaacacattctttgtggaaaaaaatccaact
gttgtaaattttccggttaaaggattggatatgaaagaatttttgttagatgacaaagag
gtccttgaaaataataaggatacctgttatgatcttatagctaatatttctcatgatggg
gaaccaggatctggaaagggaacatatcgtgttcatgtccatcataagggcaataaagag
tggtatgagctgcaagatcttcatgtaaaagatattttaccacctatgattactttatca
gaaagttatattcagatatgggaattacaagtaaagcctgttataaagacaaatccaagc
gattga
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