Hydra vulgaris (swiftwater hydra): 100203706
Help
Entry
100203706 CDS
T01080
Symbol
LOC100203706
Name
(RefSeq) programmed cell death 6-interacting protein
KO
K12200
programmed cell death 6-interacting protein
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03250
Viral life cycle - HIV-1
hmg03272
Virion - Hepatitis viruses
hmg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100203706 (LOC100203706)
03272 Virion - Hepatitis viruses
100203706 (LOC100203706)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100203706 (LOC100203706)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
100203706 (LOC100203706)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hmg04147
]
100203706 (LOC100203706)
Membrane trafficking [BR:
hmg04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
100203706 (LOC100203706)
Exosome [BR:
hmg04147
]
Exosomal proteins
Proteins found in most exosomes
100203706 (LOC100203706)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
DUF5847
SOAR
Motif
Other DBs
NCBI-GeneID:
100203706
NCBI-ProteinID:
XP_002162060
LinkDB
All DBs
Position
11:41415790..41450222
Genome browser
AA seq
840 aa
AA seq
DB search
MSSFLTCPLKKTQAVDIIKPISNYITNTFSSSVLNENKNVIAEFSQLRGNAVVHSLDKHE
ISVETLQRYYDQLVAMEGKLPIAEDQIRISFTWYDAFNKGSIFGSTKCSLSSGDYERFCV
LFNMAALLSQLASIQNLSTDDGLKTAAKYYQQSAGMFSYLKDNVFPALHTLPTPDFSVSC
LTALVSIMLAQAQDCFYQKASSDKMKDAVVAKIAMQTSDFYQDANRNAAHYETKGLWEKD
WIPVLQAKQSYFAAAAEFHQSKVNEASNKYGERVARLQKAEKLINDGIKNAGNLNIPDLK
NLAGHISKNLVQAKKDNEFIYLDKVPAQDQLTPVERATLVKALPISSPMSTNFQDLFTKL
VPMSVHQALSTYNGAKGALINSEVGKLREATHFMNGVLASLNLPAAIEDLSGEKVPQSVL
EKSSEIKEKGGLQIIDQMIQNLPDLLERNREVLNEAFRMMSEEEQEDQKMREYFKERWTR
TPSAKLTQQLKEEGAKYKSILDNATNADNIVKAKYNEHRRGLDILSKSNEEIANSLPKVG
ATTSSSGMEAVKELRFHMQQVEQIKRAREELEEEFKSATVDIQSKFLQALAAEGYLDCQK
IVDQNIEDVYAGLRTQVEKSIEDQKVLLDKIQAAYNNFAAASSGTGANPRDQMLKDLASA
YDAYMELTSNLQEGSKFYNNLTELLLKFQNKVGDLVFARKTEKEDLTKDLQLEAAKGTTA
PTPSIPVHYQQQPVKPDRPPPPNTQPTPAPRASPQNQPSSNPPQQPQYNPYPTQPTLMPQ
PGYYGPPGAMPYPSFPFHPNYGEYHINQSQVMPGQYIPPYNPQPPMGYQGYQWQQRPSQQ
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgagttcattcttaacatgtccattaaaaaaaactcaagcagttgatataataaagcct
atttcaaactacataactaatacattttctagcagtgtgcttaatgaaaataaaaatgta
attgcagaattcagccagcttcgtggaaatgcagttgttcattctttagataaacatgaa
atatcagtagaaactctacaaaggtattatgatcagttagtagccatggaggggaaattg
ccaatagcagaagatcagatccgaatatcattcacatggtatgatgcctttaataaaggt
tctatttttggatcaacaaaatgctctctcagtagtggggattatgaacggttctgtgtt
ttgtttaacatggctgcacttttatcacagctagcaagcatacaaaacctttctacagat
gatggattaaaaacagcagcaaaatattatcagcaatcagctgggatgttctcatattta
aaagataatgttttcccagctcttcatacactaccaacaccagacttttctgtaagctgt
ttgactgctcttgtatctattatgcttgcacaagctcaggattgtttctatcaaaaagcc
tcatcagataaaatgaaagatgctgttgttgcaaaaattgcaatgcaaacctcagacttt
tatcaagatgccaatcgaaatgcagcgcactatgaaacaaagggactgtgggaaaaggat
tggattccagttcttcaagcaaagcaatcttattttgctgcagctgctgaatttcatcaa
tcaaaagttaatgaagcttcaaataaatatggtgaaagagttgcacgtttgcagaaagct
gaaaagttaataaatgatggtataaaaaatgctggcaacctcaatattcctgacctaaag
aacttggctggccatatttctaaaaaccttgtgcaagctaaaaaggataatgaatttatt
tacttggataaggttccagctcaagatcagctaacacctgttgaacgtgctacacttgtt
aaagcacttcctatatcttcaccaatgtcaactaatttccaggatttgtttacaaaactt
gtaccaatgtctgttcatcaagctctctcgacctacaatggtgcaaaaggtgctctcatc
aacagtgaagttggaaaactgagggaagctacacactttatgaatggggtgttagcttct
ttaaatttaccagcagcaattgaagatctctcaggtgaaaaggttccccaatcagtattg
gaaaaatcatcagaaataaaagaaaagggtggtttgcagataatagaccagatgattcag
aatctccctgatcttctggaaagaaatcgagaagttcttaatgaggcatttcgcatgatg
tcagaagaagagcaagaagaccagaaaatgcgtgaatattttaaagaaagatggactcgt
acaccatctgcaaaattaactcagcagttaaaagaggaaggagctaagtacaaaagtatc
ttagataatgctacaaatgctgataacatagtaaaagcaaagtacaatgaacaccgcaga
gggttggatatactttcaaaatcaaatgaagaaattgctaattctcttccaaaagttggg
gcaactacatcaagcagcggcatggaagccgtcaaagaactacgatttcatatgcaacag
gtggaacaaataaagagagcccgtgaagaattggaagaagaatttaaaagtgccactgtt
gatattcaaagcaaatttttacaagctttagccgctgaaggttatcttgattgccaaaaa
atagttgatcagaatatagaagatgtttatgctggtttgagaactcaagttgaaaaaagt
atagaagaccaaaaagtgctcttagataaaatacaggcagcttataataattttgctgca
gcttcaagcggaactggtgctaatccacgtgatcaaatgcttaaagacttagcaagtgca
tatgatgcttatatggagttaacaagtaatcttcaagaaggatcaaagttctataacaat
ttgacagagcttctgttgaagttccagaataaagttggagatcttgtttttgctcgaaag
actgaaaaagaagatctcaccaaagatctccagctagaagcagcaaagggtacaacggct
ccaactcctagcatacctgtacattatcaacaacagccagttaagccagatagaccacct
cctcctaacactcagccaacccctgcgcctcgtgcttcaccacaaaatcaaccttctagc
aatcctccacagcaaccgcaatataatccgtatcctactcaaccaacgcttatgcctcaa
cctggttattatgggcctcctggtgcaatgccatatccatcttttccgtttcatccgaat
tatggggagtatcatataaatcagagtcaagtaatgcctggacaatacattcctccgtat
aacccacagccacctatgggataccagggttaccagtggcaacaaagaccgtctcaacaa
taa
DBGET
integrated database retrieval system
